Lineage for Protein: Glutamate decarboxylase beta, GadB

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1379866Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 1379867Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 1380885Family c.67.1.6: Pyridoxal-dependent decarboxylase [69565] (4 proteins)
    automatically mapped to Pfam PF00282
  6. 1380896Protein Glutamate decarboxylase beta, GadB [102596] (2 species)

Species:

  1. 1380897Escherichia coli K-12 [TaxId:83333] [188775] (2 PDB entries)
    1. Domains for 3fz6:
      1. 1380904Domain d3fz6a_: 3fz6 A: [176185]
        automated match to d1pmob_
        complexed with pmp, xe
      2. 1380905Domain d3fz6b_: 3fz6 B: [176186]
        automated match to d1pmob_
        complexed with pmp, xe
      3. 1380906Domain d3fz6c_: 3fz6 C: [176187]
        automated match to d1pmob_
        complexed with pmp, xe
      4. 1380907Domain d3fz6d_: 3fz6 D: [176188]
        automated match to d1pmob_
        complexed with pmp, xe
      5. 1380908Domain d3fz6e_: 3fz6 E: [176189]
        automated match to d1pmob_
        complexed with pmp, xe
      6. 1380909Domain d3fz6f_: 3fz6 F: [176190]
        automated match to d1pmob_
        complexed with pmp, xe
    2. Domains for 3fz7:
      1. 1380898Domain d3fz7a_: 3fz7 A: [176191]
        automated match to d1pmob_
        complexed with po4
      2. 1380899Domain d3fz7b_: 3fz7 B: [176192]
        automated match to d1pmob_
        complexed with po4
      3. 1380900Domain d3fz7c_: 3fz7 C: [176193]
        automated match to d1pmob_
        complexed with po4
      4. 1380901Domain d3fz7d_: 3fz7 D: [176194]
        automated match to d1pmob_
        complexed with po4
      5. 1380902Domain d3fz7e_: 3fz7 E: [176195]
        automated match to d1pmob_
        complexed with po4
      6. 1380903Domain d3fz7f_: 3fz7 F: [176196]
        automated match to d1pmob_
        complexed with po4
  2. 1380910Escherichia coli [TaxId:562] [102597] (5 PDB entries)
    1. Domains for 1pmm:
      1. 1380911Domain d1pmma_: 1pmm A: [94901]
        complexed with acy, plp
      2. 1380912Domain d1pmmb_: 1pmm B: [94902]
        complexed with acy, plp
      3. 1380913Domain d1pmmc_: 1pmm C: [94903]
        complexed with acy, plp
      4. 1380914Domain d1pmmd_: 1pmm D: [94904]
        complexed with acy, plp
      5. 1380915Domain d1pmme_: 1pmm E: [94905]
        complexed with acy, plp
      6. 1380916Domain d1pmmf_: 1pmm F: [94906]
        complexed with acy, plp
    2. Domains for 1pmo:
      1. 1380929Domain d1pmoa_: 1pmo A: [94908]
        complexed with plr, trs
      2. 1380930Domain d1pmob_: 1pmo B: [94909]
        complexed with plr, trs
      3. 1380931Domain d1pmoc_: 1pmo C: [94910]
        complexed with plr, trs
      4. 1380932Domain d1pmod_: 1pmo D: [94911]
        complexed with plr, trs
      5. 1380933Domain d1pmoe_: 1pmo E: [94912]
        complexed with plr, trs
      6. 1380934Domain d1pmof_: 1pmo F: [94913]
        complexed with plr, trs
    3. Domains for 2dgk:
      1. 1380917Domain d2dgka_: 2dgk A: [163631]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
      2. 1380918Domain d2dgkb_: 2dgk B: [163632]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
      3. 1380919Domain d2dgkc_: 2dgk C: [163633]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
      4. 1380920Domain d2dgkd_: 2dgk D: [163634]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
      5. 1380921Domain d2dgke_: 2dgk E: [163635]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
      6. 1380922Domain d2dgkf_: 2dgk F: [163636]
        automated match to d1pmoa_
        complexed with edo, plp, so4; mutant
    4. Domains for 2dgl:
      1. 1380935Domain d2dgla1: 2dgl A:4-452 [131502]
        automatically matched to d1pmob_
        complexed with acy, br, plp
      2. 1380936Domain d2dglb1: 2dgl B:4-452 [131503]
        automatically matched to d1pmob_
        complexed with acy, br, plp
      3. 1380937Domain d2dglc1: 2dgl C:4-452 [131504]
        automatically matched to d1pmob_
        complexed with acy, br, plp
      4. 1380938Domain d2dgld1: 2dgl D:4-452 [131505]
        automatically matched to d1pmob_
        complexed with acy, br, plp
      5. 1380939Domain d2dgle1: 2dgl E:4-452 [131506]
        automatically matched to d1pmob_
        complexed with acy, br, plp
      6. 1380940Domain d2dglf1: 2dgl F:4-452 [131507]
        automatically matched to d1pmob_
        complexed with acy, br, plp
    5. Domains for 2dgm:
      1. 1380923Domain d2dgma_: 2dgm A: [131508]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp
      2. 1380924Domain d2dgmb_: 2dgm B: [131509]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp
      3. 1380925Domain d2dgmc_: 2dgm C: [131510]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp
      4. 1380926Domain d2dgmd_: 2dgm D: [131511]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp
      5. 1380927Domain d2dgme_: 2dgm E: [131512]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp
      6. 1380928Domain d2dgmf_: 2dgm F: [131513]
        automated match to d1pmob_
        complexed with acy, fmt, iod, peg, plp

More info for Protein Glutamate decarboxylase beta, GadB from c.67.1.6: Pyridoxal-dependent decarboxylase

Timeline for Protein Glutamate decarboxylase beta, GadB from c.67.1.6: Pyridoxal-dependent decarboxylase: