Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2124334Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 protein domains)
    contains Pfam PF00929
  6. 2124657Protein Hypothetical protein AT5G06450 [102483] (1 species)
    forms a ring-shaped hexamer; function unknown
  7. 2124658Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [102484] (2 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 1vk0:
    1. 2124665Domain d1vk0a1: 1vk0 A:2-206 [100839]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
    2. 2124666Domain d1vk0b1: 1vk0 B:2-206 [100840]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
    3. 2124667Domain d1vk0c1: 1vk0 C:2-206 [100841]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
    4. 2124668Domain d1vk0d1: 1vk0 D:2-206 [100842]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
    5. 2124669Domain d1vk0e1: 1vk0 E:2-206 [100843]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
    6. 2124670Domain d1vk0f1: 1vk0 F:2-206 [100844]
      Other proteins in same PDB: d1vk0a2, d1vk0b2, d1vk0c2, d1vk0d2, d1vk0e2, d1vk0f2
      structural genomics
  2. Domain(s) for 2q3s:
    1. 2124659Domain d2q3sa2: 2q3s A:2-206 [139802]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_
    2. 2124660Domain d2q3sb2: 2q3s B:2-206 [139803]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_
    3. 2124661Domain d2q3sc2: 2q3s C:2-206 [139804]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_
    4. 2124662Domain d2q3sd2: 2q3s D:2-206 [139805]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_
    5. 2124663Domain d2q3se2: 2q3s E:2-206 [139806]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_
    6. 2124664Domain d2q3sf2: 2q3s F:2-206 [139807]
      Other proteins in same PDB: d2q3sa3, d2q3sb3, d2q3sc3, d2q3sd3, d2q3se3, d2q3sf3
      automated match to d1vk0a_

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.55.3.5 Hypothetical protein AT5G06450

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.55.3.5 Hypothetical protein AT5G06450: