SCOPe 2.08: Family c.108.1.14: NagD-like

Lineage for Family c.108.1.14: NagD-like

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.108: HAD-like [56783] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.108.1: HAD-like [56784] (26 families)
   usually contains an insertion (sub)domain after strand 1

5. Family c.108.1.14: NagD-like [102317] (7 proteins)
   duplication: consists of two segment-swapped domains of this fold; this results in the insertion of a circularly permuted domain after strand 3, analogously to the Cof family

Proteins:

1. Hypothetical protein SPy1043 [142167] (1 species)

   • Species Streptococcus pyogenes [TaxId:1314] [142168] (1 PDB entry)
     Uniprot Q99ZW4 2-254

2. Hypothetical protein TM1742 [102318] (1 species)
   putative NagD protein

   • Species Thermotoga maritima [TaxId:2336] [102319] (2 PDB entries)

3. NagD [142169] (1 species)

   • Species Escherichia coli [TaxId:562] [142170] (1 PDB entry)
     Uniprot P0AF24 1-250

4. Putative hydrolase EF1188 [142173] (1 species)

   • Species Enterococcus faecalis [TaxId:1351] [142174] (1 PDB entry)
     Uniprot Q836C7 4-256

5. Putative hydrolase SP1407 [142171] (1 species)

   • Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [142172] (1 PDB entry)
     Uniprot Q97Q24 3-255

6. Putative phosphatase SMU.1415c [117507] (1 species)

   • Species Streptococcus mutans [TaxId:1309] [117508] (1 PDB entry)
     Uniprot Q8DTD6

7. automated matches [190164] (2 species)
   not a true protein

   1. Species Enterococcus faecalis [TaxId:226185] [186889] (1 PDB entry)

   2. Species Streptococcus agalactiae [TaxId:216466] [188652] (1 PDB entry)

More info for Family c.108.1.14: NagD-like

Timeline for Family c.108.1.14: NagD-like:

• Family c.108.1.14: NagD-like first appeared in SCOP 1.67
  
• Family c.108.1.14: NagD-like appears in SCOPe 2.07