SCOPe 2.08: Species: Thermus aquaticus [TaxId: 271]

Lineage for Species: Thermus aquaticus [TaxId: 271]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)
Family c.2.1.12: Transcriptional repressor Rex, C-terminal domain [102174] (2 proteins)
automatically mapped to Pfam PF02629
Protein Transcriptional repressor Rex, C-terminal domain [102175] (1 species)
forms swapped dimer with C-terminal helices
Species Thermus aquaticus [TaxId:271] [102176] (3 PDB entries)
Uniprot Q9X2V5
CASP5

PDB entries in Species: Thermus aquaticus [TaxId: 271]:

Domain(s) for 1r72:
1. Domain d1r72a4: 1r72 A:78-206 [302971]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
2. Domain d1r72b4: 1r72 B:78-206 [302973]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
3. Domain d1r72c4: 1r72 C:78-205 [302975]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
4. Domain d1r72d4: 1r72 D:78-204 [302977]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
5. Domain d1r72e4: 1r72 E:78-203 [302979]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
6. Domain d1r72f4: 1r72 F:78-207 [302981]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
7. Domain d1r72g4: 1r72 G:78-203 [302983]
  Other proteins in same PDB: d1r72a3, d1r72b3, d1r72c3, d1r72d3, d1r72e3, d1r72f3, d1r72g3
  automated match to d1xcba2
  complexed with ca, mg, nad
Domain(s) for 1xcb:
1. Domain d1xcba2: 1xcb A:78-203 [109553]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
2. Domain d1xcbb2: 1xcb B:78-203 [109555]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
3. Domain d1xcbc2: 1xcb C:78-203 [109557]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
4. Domain d1xcbd2: 1xcb D:78-203 [109559]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
5. Domain d1xcbe2: 1xcb E:78-203 [109561]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
6. Domain d1xcbf2: 1xcb F:78-203 [109563]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
7. Domain d1xcbg2: 1xcb G:78-203 [109565]
  Other proteins in same PDB: d1xcba1, d1xcbb1, d1xcbc1, d1xcbd1, d1xcbe1, d1xcbf1, d1xcbg1
  protein/DNA complex; complexed with ca, nad
Domain(s) for 2dt5:
1. Domain d2dt5a2: 2dt5 A:78-211 [131709]
  Other proteins in same PDB: d2dt5a1, d2dt5b1
  automated match to d1r72f4
  complexed with cl, gol, nad, so4
2. Domain d2dt5b2: 2dt5 B:78-211 [131711]
  Other proteins in same PDB: d2dt5a1, d2dt5b1
  automated match to d1r72f4
  complexed with cl, gol, nad, so4

More info for Species Thermus aquaticus [TaxId:271] from c.2.1.12 Transcriptional repressor Rex, C-terminal domain

Timeline for Species Thermus aquaticus [TaxId:271] from c.2.1.12 Transcriptional repressor Rex, C-terminal domain:

Species Thermus aquaticus [TaxId:271] from c.2.1.12 Transcriptional repressor Rex, C-terminal domain first appeared in SCOP 1.67, called Species Thermus aquaticus [TaxId:271] from c.2.1.12 AT-rich DNA-binding protein p25, C-terminal domain
Species Thermus aquaticus [TaxId:271] from c.2.1.12 Transcriptional repressor Rex, C-terminal domain appears in SCOPe 2.07