SCOPe 2.01: Protein: Beta-D-xylosidase, catalytic domain

Lineage for Protein: Beta-D-xylosidase, catalytic domain

Root: SCOPe 2.01
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)
Family c.1.8.3: beta-glycanases [51487] (27 proteins)
consist of a number of sequence families
Protein Beta-D-xylosidase, catalytic domain [102077] (2 species)
glycosyl hydrolase family 39

Species:

Bacillus stearothermophilus [TaxId:1422] [141780] (3 PDB entries)
Uniprot Q9ZFM2 15-361

Domains for 1w91:
1. Domain d1w91a2: 1w91 A:14-360 [120759]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
2. Domain d1w91b2: 1w91 B:14-360 [120761]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
3. Domain d1w91c2: 1w91 C:14-360 [120763]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
4. Domain d1w91d2: 1w91 D:14-360 [120765]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
5. Domain d1w91e2: 1w91 E:14-360 [120767]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
6. Domain d1w91f2: 1w91 F:14-360 [120769]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
7. Domain d1w91g2: 1w91 G:14-360 [120771]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360
8. Domain d1w91h2: 1w91 H:14-360 [120773]
  Other proteins in same PDB: d1w91a1, d1w91b1, d1w91c1, d1w91d1, d1w91e1, d1w91f1, d1w91g1, d1w91h1
  automatically matched to 1W91 A:14-360

Domains for 2bfg:

Domain d2bfga2: 2bfg A:14-360 [128424]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
complexed with anx, na, so4, xys

Domain d2bfgb2: 2bfg B:14-360 [128426]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfgc2: 2bfg C:14-360 [128428]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfgd2: 2bfg D:14-360 [128430]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfge2: 2bfg E:14-360 [128432]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfgf2: 2bfg F:14-360 [128434]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfgg2: 2bfg G:14-360 [128436]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domain d2bfgh2: 2bfg H:14-360 [128438]
Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
automatically matched to 2BFG A:14-360
complexed with anx, na, so4, xys

Domains for 2bs9:
1. Domain d2bs9a2: 2bs9 A:14-360 [129063]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  complexed with ca
2. Domain d2bs9b2: 2bs9 B:14-360 [129065]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
3. Domain d2bs9c2: 2bs9 C:14-360 [129067]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
4. Domain d2bs9d2: 2bs9 D:14-360 [129069]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
5. Domain d2bs9e2: 2bs9 E:14-360 [129071]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
6. Domain d2bs9f2: 2bs9 F:14-360 [129073]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
7. Domain d2bs9g2: 2bs9 G:14-360 [129075]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca
8. Domain d2bs9h2: 2bs9 H:14-360 [129077]
  Other proteins in same PDB: d2bs9a1, d2bs9b1, d2bs9c1, d2bs9d1, d2bs9e1, d2bs9f1, d2bs9g1, d2bs9h1
  automatically matched to 2BS9 A:14-360
  complexed with ca

Thermoanaerobacterium saccharolyticum [TaxId:28896] [102078] (2 PDB entries)
1. Domains for 1px8:
  1. Domain d1px8a2: 1px8 A:14-359 [95282]
    Other proteins in same PDB: d1px8a1, d1px8b1
    complexed with xyp
  2. Domain d1px8b2: 1px8 B:14-359 [95284]
    Other proteins in same PDB: d1px8a1, d1px8b1
    complexed with xyp
2. Domains for 1uhv:
  1. Domain d1uhva2: 1uhv A:14-359 [99403]
    Other proteins in same PDB: d1uhva1, d1uhvb1, d1uhvc1, d1uhvd1
    complexed with dfx
  2. Domain d1uhvb2: 1uhv B:14-359 [99405]
    Other proteins in same PDB: d1uhva1, d1uhvb1, d1uhvc1, d1uhvd1
    complexed with dfx
  3. Domain d1uhvc2: 1uhv C:14-359 [99407]
    Other proteins in same PDB: d1uhva1, d1uhvb1, d1uhvc1, d1uhvd1
    complexed with dfx
  4. Domain d1uhvd2: 1uhv D:14-359 [99409]
    Other proteins in same PDB: d1uhva1, d1uhvb1, d1uhvc1, d1uhvd1
    complexed with dfx

More info for Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases

Timeline for Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases:

Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases first appeared in SCOP 1.67
Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases appears in SCOP 1.75
Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases appears in SCOPe 2.02
Protein Beta-D-xylosidase, catalytic domain from c.1.8.3: beta-glycanases appears in the current release, SCOPe 2.08