SCOPe 2.08: Protein: Cyclomaltodextrinase, central domain

Lineage for Protein: Cyclomaltodextrinase, central domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein Cyclomaltodextrinase, central domain [102058] (1 species)
protein shares similar domain organization with maltogenic amylases but differs in the spatial arrangement of its domains

Species:

Flavobacterium sp. 92 [TaxId:197856] [102059] (6 PDB entries)
1. Domains for 1h3g:
  1. Domain d1h3ga3: 1h3g A:96-517 [90596]
    Other proteins in same PDB: d1h3ga1, d1h3ga2, d1h3ga4, d1h3gb1, d1h3gb2, d1h3gb4
    complexed with ca
  2. Domain d1h3gb3: 1h3g B:96-517 [90599]
    Other proteins in same PDB: d1h3ga1, d1h3ga2, d1h3ga4, d1h3gb1, d1h3gb2, d1h3gb4
    complexed with ca
2. Domains for 3edd:
  1. Domain d3edda2: 3edd A:96-517 [245826]
    Other proteins in same PDB: d3edda1, d3edda3, d3eddb1, d3eddb3
    automated match to d1h3ga3
    complexed with ca
  2. Domain d3eddb2: 3edd B:96-517 [245829]
    Other proteins in same PDB: d3edda1, d3edda3, d3eddb1, d3eddb3
    automated match to d1h3ga3
    complexed with ca
3. Domains for 3ede:
  1. Domain d3edea2: 3ede A:96-517 [245832]
    Other proteins in same PDB: d3edea1, d3edea3, d3edeb1, d3edeb3
    automated match to d1h3ga3
    complexed with ca, gol
  2. Domain d3edeb2: 3ede B:96-517 [245835]
    Other proteins in same PDB: d3edea1, d3edea3, d3edeb1, d3edeb3
    automated match to d1h3ga3
    complexed with ca, gol
4. Domains for 3edf:
  1. Domain d3edfa2: 3edf A:96-517 [245838]
    Other proteins in same PDB: d3edfa1, d3edfa3, d3edfb1, d3edfb3
    automated match to d1h3ga3
    complexed with ca, gol
  2. Domain d3edfb2: 3edf B:96-517 [245841]
    Other proteins in same PDB: d3edfa1, d3edfa3, d3edfb1, d3edfb3
    automated match to d1h3ga3
    complexed with ca, gol
5. Domains for 3edj:
  1. Domain d3edja2: 3edj A:96-517 [245844]
    Other proteins in same PDB: d3edja1, d3edja3, d3edjb1, d3edjb3
    automated match to d1h3ga3
    complexed with ca, gol
  2. Domain d3edjb2: 3edj B:96-517 [245847]
    Other proteins in same PDB: d3edja1, d3edja3, d3edjb1, d3edjb3
    automated match to d1h3ga3
    complexed with ca, gol
6. Domains for 3edk:
  1. Domain d3edka2: 3edk A:96-517 [245850]
    Other proteins in same PDB: d3edka1, d3edka3, d3edkb1, d3edkb3
    automated match to d1h3ga3
    complexed with ca, gol
  2. Domain d3edkb2: 3edk B:96-517 [245853]
    Other proteins in same PDB: d3edka1, d3edka3, d3edkb1, d3edkb3
    automated match to d1h3ga3
    complexed with ca, gol

More info for Protein Cyclomaltodextrinase, central domain from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Cyclomaltodextrinase, central domain from c.1.8.1: Amylase, catalytic domain:

Protein Cyclomaltodextrinase, central domain from c.1.8.1: Amylase, catalytic domain first appeared in SCOP 1.67
Protein Cyclomaltodextrinase, central domain from c.1.8.1: Amylase, catalytic domain appears in SCOPe 2.07