Lineage for Protein: Beta-D-xylosidase

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2400339Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 2400340Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 2400758Family b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 [89388] (4 protein domains)
    interrupted by the catalytic domain; the C-terminal core is similar to the alpha-amylase domain
  6. 2400782Protein Beta-D-xylosidase [101926] (2 species)
    glycosyl hydrolase family 39

Species:

  1. 2400783Bacillus stearothermophilus [TaxId:1422] [141555] (3 PDB entries)
    Uniprot Q9ZFM2 5-14,362-503
    1. Domains for 1w91:
      1. 2400784Domain d1w91a1: 1w91 A:4-13,A:361-502 [120758]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
      2. 2400785Domain d1w91b1: 1w91 B:4-13,B:361-502 [120760]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      3. 2400786Domain d1w91c1: 1w91 C:4-13,C:361-502 [120762]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      4. 2400787Domain d1w91d1: 1w91 D:4-13,D:361-502 [120764]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      5. 2400788Domain d1w91e1: 1w91 E:4-13,E:361-502 [120766]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      6. 2400789Domain d1w91f1: 1w91 F:4-13,F:361-502 [120768]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      7. 2400790Domain d1w91g1: 1w91 G:4-13,G:361-502 [120770]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
      8. 2400791Domain d1w91h1: 1w91 H:4-13,H:361-502 [120772]
        Other proteins in same PDB: d1w91a2, d1w91b2, d1w91c2, d1w91d2, d1w91e2, d1w91f2, d1w91g2, d1w91h2
        automatically matched to 1W91 A:4-13,A:361-502
    2. Domains for 2bfg:
      1. 2400800Domain d2bfga1: 2bfg A:4-13,A:361-502 [128423]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        complexed with anx, na, so4, xys
      2. 2400801Domain d2bfgb1: 2bfg B:2-13,B:361-502 [128425]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      3. 2400802Domain d2bfgc1: 2bfg C:2-13,C:361-502 [128427]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      4. 2400803Domain d2bfgd1: 2bfg D:2-13,D:361-502 [128429]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      5. 2400804Domain d2bfge1: 2bfg E:2-13,E:361-502 [128431]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      6. 2400805Domain d2bfgf1: 2bfg F:2-13,F:361-502 [128433]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      7. 2400806Domain d2bfgg1: 2bfg G:2-13,G:361-502 [128435]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
      8. 2400807Domain d2bfgh1: 2bfg H:2-13,H:361-502 [128437]
        Other proteins in same PDB: d2bfga2, d2bfgb2, d2bfgc2, d2bfgd2, d2bfge2, d2bfgf2, d2bfgg2, d2bfgh2
        automated match to d2bfga1
        complexed with anx, na, so4, xys
    3. Domains for 2bs9:
      1. 2400792Domain d2bs9a1: 2bs9 A:4-13,A:361-502 [129062]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        complexed with ca
      2. 2400793Domain d2bs9b1: 2bs9 B:2-13,B:361-502 [129064]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      3. 2400794Domain d2bs9c1: 2bs9 C:2-13,C:361-502 [129066]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      4. 2400795Domain d2bs9d1: 2bs9 D:2-13,D:361-502 [129068]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      5. 2400796Domain d2bs9e1: 2bs9 E:2-13,E:361-502 [129070]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      6. 2400797Domain d2bs9f1: 2bs9 F:2-13,F:361-502 [129072]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      7. 2400798Domain d2bs9g1: 2bs9 G:2-13,G:361-502 [129074]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
      8. 2400799Domain d2bs9h1: 2bs9 H:2-13,H:361-502 [129076]
        Other proteins in same PDB: d2bs9a2, d2bs9b2, d2bs9c2, d2bs9d2, d2bs9e2, d2bs9f2, d2bs9g2, d2bs9h2
        automated match to d2bs9a1
        complexed with ca
  2. 2400808Thermoanaerobacterium saccharolyticum [TaxId:28896] [101927] (2 PDB entries)
    1. Domains for 1px8:
      1. 2400813Domain d1px8a1: 1px8 A:1-13,A:360-500 [95281]
        Other proteins in same PDB: d1px8a2, d1px8b2
        complexed with xyp
      2. 2400814Domain d1px8b1: 1px8 B:1-13,B:360-500 [95283]
        Other proteins in same PDB: d1px8a2, d1px8b2
        complexed with xyp
    2. Domains for 1uhv:
      1. 2400809Domain d1uhva1: 1uhv A:1-13,A:360-500 [99402]
        Other proteins in same PDB: d1uhva2, d1uhvb2, d1uhvc2, d1uhvd2
        complexed with dfx
      2. 2400810Domain d1uhvb1: 1uhv B:1-13,B:360-500 [99404]
        Other proteins in same PDB: d1uhva2, d1uhvb2, d1uhvc2, d1uhvd2
        complexed with dfx
      3. 2400811Domain d1uhvc1: 1uhv C:1-13,C:360-500 [99406]
        Other proteins in same PDB: d1uhva2, d1uhvb2, d1uhvc2, d1uhvd2
        complexed with dfx
      4. 2400812Domain d1uhvd1: 1uhv D:1-13,D:360-500 [99408]
        Other proteins in same PDB: d1uhva2, d1uhvb2, d1uhvc2, d1uhvd2
        complexed with dfx

More info for Protein Beta-D-xylosidase from b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51

Timeline for Protein Beta-D-xylosidase from b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51:

  • Protein Beta-D-xylosidase from b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 first appeared in SCOP 1.67
  • Protein Beta-D-xylosidase from b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 appears in SCOPe 2.06