Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2789270Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2789672Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (36 proteins)
    barrel, closed; n=5, S=8
  6. 2790090Protein Ribosomal protein S28e [101765] (2 species)
    incomplete OB-fold lacking the last strand
  7. 2790093Species Pyrococcus horikoshii [TaxId:53953] [101766] (1 PDB entry)

PDB entry in Species: Pyrococcus horikoshii [TaxId: 53953]:

  • Domain(s) for 1ny4:
    • 2790094Domain d1ny4a_: 1ny4 A: [92316]
      structural genomics; NESG target JR19
      missing some secondary structures that made up less than one-third of the common domain

More info for Species Pyrococcus horikoshii [TaxId:53953] from b.40.4.5 Ribosomal protein S28e

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from b.40.4.5 Ribosomal protein S28e: