SCOPe 2.08: Protein: Tetraomegavirus capsid protein

Lineage for Protein: Tetraomegavirus capsid protein

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.8: Tetraviridae-like VP [101568] (1 protein)
automatically mapped to Pfam PF03566
Protein Tetraomegavirus capsid protein [101569] (1 species)
contains an insert beta-sandwich domain

Species:

Nudaurelia capensis omega virus [TaxId:12541] [101570] (1 PDB entry)
- Domains for 1ohf:
  1. Domain d1ohfa_: 1ohf A: [93014]
    complexed with mg
  2. Domain d1ohfb_: 1ohf B: [93015]
    complexed with mg
  3. Domain d1ohfc_: 1ohf C: [93016]
    complexed with mg
  4. Domain d1ohfd_: 1ohf D: [93017]
    complexed with mg

More info for Protein Tetraomegavirus capsid protein from b.121.4.8: Tetraviridae-like VP

Timeline for Protein Tetraomegavirus capsid protein from b.121.4.8: Tetraviridae-like VP:

Protein Tetraomegavirus capsid protein from b.121.4.8: Tetraviridae-like VP first appeared in SCOP 1.67
Protein Tetraomegavirus capsid protein from b.121.4.8: Tetraviridae-like VP appears in SCOPe 2.07