SCOPe 2.05: Family a.194.1.1: L27 domain

Lineage for Family a.194.1.1: L27 domain

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.194: L27 domain [101287] (1 superfamily)
   6 helices, heterodimer of 3-helical domains

4. Superfamily a.194.1: L27 domain [101288] (1 family)

5. Family a.194.1.1: L27 domain [101289] (6 proteins)

Proteins:

1. Associated tight junction protein Pals-1 [101290] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [101291] (1 PDB entry)

   2. Species Norway rat (Rattus norvegicus) [TaxId:10116] [140706] (1 PDB entry)
      Uniprot Q63ZW7 4-65
      identical sequence to mouse domain

2. Lin-7 [140709] (2 species)

   1. Species Mouse (Mus musculus) [TaxId:10090] [140710] (1 PDB entry)
      Uniprot O88951 8-64
      homolog B

   2. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [140711] (1 PDB entry)
      Uniprot Q9U245 116-165

3. Maguk p55 subfamily member 5, Patj [101292] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [140707] (1 PDB entry)
      Uniprot Q8N3R9 118-177

   2. Species Mouse (Mus musculus) [TaxId:10090] [101293] (1 PDB entry)

4. Peripheral plasma membrane protein cask [101296] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [140708] (1 PDB entry)
      Uniprot O14936 403-456

   2. Species Norway rat (Rattus norvegicus) [TaxId:10116] [101297] (1 PDB entry)

5. Presynaptic protein sap97 [101294] (1 species)

   • Species Norway rat (Rattus norvegicus) [TaxId:10116] [101295] (1 PDB entry)

6. automated matches [254455] (1 species)
   not a true protein

   • Species Mouse (Mus musculus) [TaxId:10090] [254970] (1 PDB entry)

More info for Family a.194.1.1: L27 domain

Timeline for Family a.194.1.1: L27 domain:

• Family a.194.1.1: L27 domain first appeared in SCOP 1.67
  
• Family a.194.1.1: L27 domain appears in SCOPe 2.04
  
• Family a.194.1.1: L27 domain appears in SCOPe 2.06
  
• Family a.194.1.1: L27 domain appears in the current release, SCOPe 2.08