SCOPe 2.02: Species: Human (Homo sapiens) [TaxId: 9606]

Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

Root: SCOPe 2.02
Class a: All alpha proteins [46456] (284 folds)
Fold a.60: SAM domain-like [47768] (16 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.12: PsbU/PolX domain-like [81585] (2 families)
contains one classic and one pseudo HhH motifs
Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 proteins)
topological similarity to the N-terminal domain
Protein DNA polymerase lambda [101253] (1 species)
Species Human (Homo sapiens) [TaxId:9606] [101254] (16 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

Domain(s) for 1rzt:
1. Domain d1rzta2: 1rzt A:329-385 [98225]
  Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
  protein/DNA complex; complexed with edo, na
2. Domain d1rzte2: 1rzt E:329-385 [98228]
  Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
  protein/DNA complex; complexed with edo, na
3. Domain d1rzti2: 1rzt I:329-385 [98231]
  Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
  protein/DNA complex; complexed with edo, na
4. Domain d1rztm2: 1rzt M:329-385 [98234]
  Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
  protein/DNA complex; complexed with edo, na

Domain(s) for 1xsl:

Domain d1xsla2: 1xsl A:329-385 [122271]
Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, mg, na

Domain d1xsle2: 1xsl E:329-385 [122274]
Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, mg, na

Domain d1xsli2: 1xsl I:329-385 [122277]
Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, mg, na

Domain d1xslm2: 1xsl M:329-385 [122280]
Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, mg, na

Domain(s) for 1xsn:
- Domain d1xsna2: 1xsn A:329-385 [122283]
  Other proteins in same PDB: d1xsna1, d1xsna3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with d3t, edo, mg, na
Domain(s) for 1xsp:
- Domain d1xspa2: 1xsp A:329-385 [122286]
  Other proteins in same PDB: d1xspa1, d1xspa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with na, ppv
Domain(s) for 2bcq:
- Domain d2bcqa2: 2bcq A:329-385 [128305]
  Other proteins in same PDB: d2bcqa1, d2bcqa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with edo, mg, na, ppv
Domain(s) for 2bcr:
- Domain d2bcra2: 2bcr A:329-385 [128308]
  Other proteins in same PDB: d2bcra1, d2bcra3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with edo, mg, na, ppv
Domain(s) for 2bcs:
- Domain d2bcsa2: 2bcs A:329-385 [128311]
  Other proteins in same PDB: d2bcsa1, d2bcsa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with mg, na, ppv
Domain(s) for 2bcu:
- Domain d2bcua2: 2bcu A:329-385 [128314]
  Other proteins in same PDB: d2bcua1, d2bcua3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with na, ppv
Domain(s) for 2bcv:
- Domain d2bcva2: 2bcv A:329-385 [128317]
  Other proteins in same PDB: d2bcva1, d2bcva3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with mg, na, ttp

Domain(s) for 2gws:

Domain d2gwsa2: 2gws A:329-385 [135814]
Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, cl, edo, mg, na

Domain d2gwse2: 2gws E:329-385 [135817]
Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, cl, edo, mg, na

Domain d2gwsi2: 2gws I:329-385 [135820]
Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, cl, edo, mg, na

Domain d2gwsm2: 2gws M:329-385 [135823]
Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
automatically matched to d1rzta2
protein/DNA complex; complexed with cac, cl, edo, mg, na

Domain(s) for 2pfn:
- Domain d2pfna2: 2pfn A:329-385 [139673]
  Other proteins in same PDB: d2pfna1, d2pfna3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with dup, mg, na
Domain(s) for 2pfo:
- Domain d2pfoa2: 2pfo A:329-385 [139676]
  Other proteins in same PDB: d2pfoa1, d2pfoa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with dup, edo, mg, mn, na
Domain(s) for 2pfp:
- Domain d2pfpa2: 2pfp A:329-385 [139679]
  Other proteins in same PDB: d2pfpa1, d2pfpa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with dcp, mg, na
Domain(s) for 2pfq:
- Domain d2pfqa2: 2pfq A:329-385 [139682]
  Other proteins in same PDB: d2pfqa1, d2pfqa3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with dcp, mg, mn, na, ppv
Domain(s) for 3c5f:
1. Domain d3c5fa2: 3c5f A:329-385 [155938]
  Other proteins in same PDB: d3c5fa1, d3c5fa3, d3c5fb1, d3c5fb3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with na; mutant
2. Domain d3c5fb2: 3c5f B:329-385 [155941]
  Other proteins in same PDB: d3c5fa1, d3c5fa3, d3c5fb1, d3c5fb3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with na; mutant
Domain(s) for 3c5g:
1. Domain d3c5ga2: 3c5g A:329-385 [155944]
  Other proteins in same PDB: d3c5ga1, d3c5ga3, d3c5gb1, d3c5gb3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with d3t, edo, mg, na; mutant
2. Domain d3c5gb2: 3c5g B:329-385 [155947]
  Other proteins in same PDB: d3c5ga1, d3c5ga3, d3c5gb1, d3c5gb3
  automatically matched to d1rzta2
  protein/DNA complex; complexed with d3t, edo, mg, na; mutant

More info for Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda:

Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda first appeared in SCOP 1.67
Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda appears in SCOPe 2.01
Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda appears in SCOPe 2.03
Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda appears in the current release, SCOPe 2.08