Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999483Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1999484Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 protein domains)
    topological similarity to the N-terminal domain
    automatically mapped to Pfam PF10391
  6. 1999662Protein DNA polymerase lambda [101253] (1 species)
  7. 1999663Species Human (Homo sapiens) [TaxId:9606] [101254] (27 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1rzt:
    1. 1999678Domain d1rzta2: 1rzt A:329-385 [98225]
      Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
      protein/DNA complex; complexed with edo, na
    2. 1999679Domain d1rzte2: 1rzt E:329-385 [98228]
      Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
      protein/DNA complex; complexed with edo, na
    3. 1999680Domain d1rzti2: 1rzt I:329-385 [98231]
      Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
      protein/DNA complex; complexed with edo, na
    4. 1999681Domain d1rztm2: 1rzt M:329-385 [98234]
      Other proteins in same PDB: d1rzta1, d1rzta3, d1rzte1, d1rzte3, d1rzti1, d1rzti3, d1rztm1, d1rztm3
      protein/DNA complex; complexed with edo, na
  2. Domain(s) for 1xsl:
    1. 1999684Domain d1xsla2: 1xsl A:329-385 [122271]
      Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
      automatically matched to d1rzta2
      protein/DNA complex; complexed with cac, mg, na
    2. 1999685Domain d1xsle2: 1xsl E:329-385 [122274]
      Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
      automatically matched to d1rzta2
      protein/DNA complex; complexed with cac, mg, na
    3. 1999686Domain d1xsli2: 1xsl I:329-385 [122277]
      Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
      automatically matched to d1rzta2
      protein/DNA complex; complexed with cac, mg, na
    4. 1999687Domain d1xslm2: 1xsl M:329-385 [122280]
      Other proteins in same PDB: d1xsla1, d1xsla3, d1xsle1, d1xsle3, d1xsli1, d1xsli3, d1xslm1, d1xslm3
      automatically matched to d1rzta2
      protein/DNA complex; complexed with cac, mg, na
  3. Domain(s) for 1xsn:
  4. Domain(s) for 1xsp:
  5. Domain(s) for 2bcq:
  6. Domain(s) for 2gws:
    1. 1999691Domain d2gwsa2: 2gws A:329-385 [135814]
      Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
      automated match to d2pfna2
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    2. 1999692Domain d2gwse2: 2gws E:329-385 [135817]
      Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
      automated match to d2pfna2
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    3. 1999693Domain d2gwsi2: 2gws I:329-385 [135820]
      Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
      automated match to d2pfna2
      protein/DNA complex; complexed with cac, cl, edo, mg, na
    4. 1999694Domain d2gwsm2: 2gws M:329-385 [135823]
      Other proteins in same PDB: d2gwsa1, d2gwsa3, d2gwse1, d2gwse3, d2gwsi1, d2gwsi3, d2gwsm1, d2gwsm3
      automated match to d2pfna2
      protein/DNA complex; complexed with cac, cl, edo, mg, na
  7. Domain(s) for 2pfn:
  8. Domain(s) for 2pfo:
  9. Domain(s) for 2pfp:
  10. Domain(s) for 2pfq:
  11. Domain(s) for 3c5f:
    1. 1999688Domain d3c5fa2: 3c5f A:329-385 [155938]
      Other proteins in same PDB: d3c5fa1, d3c5fa3, d3c5fb1, d3c5fb3
      automated match to d1xsna2
      protein/DNA complex; complexed with na; mutant
    2. 1999689Domain d3c5fb2: 3c5f B:329-385 [155941]
      Other proteins in same PDB: d3c5fa1, d3c5fa3, d3c5fb1, d3c5fb3
      automated match to d1xsna2
      protein/DNA complex; complexed with na; mutant
  12. Domain(s) for 3c5g:
    1. 1999676Domain d3c5ga2: 3c5g A:329-385 [155944]
      Other proteins in same PDB: d3c5ga1, d3c5ga3, d3c5gb1, d3c5gb3
      automated match to d1xsna2
      protein/DNA complex; complexed with d3t, edo, mg, na; mutant
    2. 1999677Domain d3c5gb2: 3c5g B:329-385 [155947]
      Other proteins in same PDB: d3c5ga1, d3c5ga3, d3c5gb1, d3c5gb3
      automated match to d1xsna2
      protein/DNA complex; complexed with d3t, edo, mg, na; mutant
  13. Domain(s) for 3hw8:
  14. Domain(s) for 3mdc:
  15. Domain(s) for 3mgh:
    1. 1999696Domain d3mgha2: 3mgh A:329-385 [247695]
      Other proteins in same PDB: d3mgha1, d3mgha3, d3mghc1, d3mghc3
      automated match to d1xsna2
      protein/DNA complex; complexed with na; mutant
    2. 1999697Domain d3mghc2: 3mgh C:329-385 [247698]
      Other proteins in same PDB: d3mgha1, d3mgha3, d3mghc1, d3mghc3
      automated match to d1xsna2
      protein/DNA complex; complexed with na; mutant
  16. Domain(s) for 3mgi:
  17. Domain(s) for 3pml:
    1. 1999707Domain d3pmla2: 3pml A:329-385 [248522]
      Other proteins in same PDB: d3pmla1, d3pmla3, d3pmlb1, d3pmlb3
      automated match to d1xsna2
      protein/DNA complex; complexed with 1gc, mg, na
    2. 1999708Domain d3pmlb2: 3pml B:329-385 [248525]
      Other proteins in same PDB: d3pmla1, d3pmla3, d3pmlb1, d3pmlb3
      automated match to d1xsna2
      protein/DNA complex; complexed with 1gc, mg, na
  18. Domain(s) for 3pmn:
  19. Domain(s) for 3pnc:
  20. Domain(s) for 3upq:
  21. Domain(s) for 3uq0:
  22. Domain(s) for 3uq1:
  23. Domain(s) for 3uq2:
  24. Domain(s) for 4fo6:
  25. Domain(s) for 4k4g:
    1. 1999702Domain d4k4ga2: 4k4g A:329-385 [257797]
      Other proteins in same PDB: d4k4ga1, d4k4ga3, d4k4ga4, d4k4ge1, d4k4ge3, d4k4ge4, d4k4gi1, d4k4gi3, d4k4gi4, d4k4gm1, d4k4gm3, d4k4gm4
      automated match to d1xsna2
      protein/DNA complex; complexed with 1s0, act, ca, cac
    2. 1999703Domain d4k4ge2: 4k4g E:329-385 [257794]
      Other proteins in same PDB: d4k4ga1, d4k4ga3, d4k4ga4, d4k4ge1, d4k4ge3, d4k4ge4, d4k4gi1, d4k4gi3, d4k4gi4, d4k4gm1, d4k4gm3, d4k4gm4
      automated match to d1xsna2
      protein/DNA complex; complexed with 1s0, act, ca, cac
    3. 1999704Domain d4k4gi2: 4k4g I:329-385 [262795]
      Other proteins in same PDB: d4k4ga1, d4k4ga3, d4k4ga4, d4k4ge1, d4k4ge3, d4k4ge4, d4k4gi1, d4k4gi3, d4k4gi4, d4k4gm1, d4k4gm3, d4k4gm4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1s0, act, ca, cac
    4. 1999705Domain d4k4gm2: 4k4g M:329-385 [262798]
      Other proteins in same PDB: d4k4ga1, d4k4ga3, d4k4ga4, d4k4ge1, d4k4ge3, d4k4ge4, d4k4gi1, d4k4gi3, d4k4gi4, d4k4gm1, d4k4gm3, d4k4gm4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1s0, act, ca, cac
  26. Domain(s) for 4k4h:
    1. 1999698Domain d4k4ha2: 4k4h A:329-385 [262801]
      Other proteins in same PDB: d4k4ha1, d4k4ha3, d4k4ha4, d4k4he1, d4k4he3, d4k4he4, d4k4hi1, d4k4hi3, d4k4hi4, d4k4hm1, d4k4hm3, d4k4hm4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1rz, act, ca
    2. 1999699Domain d4k4he2: 4k4h E:329-385 [258918]
      Other proteins in same PDB: d4k4ha1, d4k4ha3, d4k4ha4, d4k4he1, d4k4he3, d4k4he4, d4k4hi1, d4k4hi3, d4k4hi4, d4k4hm1, d4k4hm3, d4k4hm4
      automated match to d1xsna2
      protein/DNA complex; complexed with 1rz, act, ca
    3. 1999700Domain d4k4hi2: 4k4h I:329-385 [262804]
      Other proteins in same PDB: d4k4ha1, d4k4ha3, d4k4ha4, d4k4he1, d4k4he3, d4k4he4, d4k4hi1, d4k4hi3, d4k4hi4, d4k4hm1, d4k4hm3, d4k4hm4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1rz, act, ca
    4. 1999701Domain d4k4hm2: 4k4h M:329-385 [262807]
      Other proteins in same PDB: d4k4ha1, d4k4ha3, d4k4ha4, d4k4he1, d4k4he3, d4k4he4, d4k4hi1, d4k4hi3, d4k4hi4, d4k4hm1, d4k4hm3, d4k4hm4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1rz, act, ca
  27. Domain(s) for 4k4i:
    1. 1999709Domain d4k4ia2: 4k4i A:329-385 [266521]
      Other proteins in same PDB: d4k4ia1, d4k4ia3, d4k4ia4, d4k4ie1, d4k4ie3, d4k4ie4, d4k4ii1, d4k4ii3, d4k4ii4, d4k4im1, d4k4im3, d4k4im4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1ry, act, ca, cac
    2. 1999710Domain d4k4ie2: 4k4i E:329-385 [266524]
      Other proteins in same PDB: d4k4ia1, d4k4ia3, d4k4ia4, d4k4ie1, d4k4ie3, d4k4ie4, d4k4ii1, d4k4ii3, d4k4ii4, d4k4im1, d4k4im3, d4k4im4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1ry, act, ca, cac
    3. 1999711Domain d4k4ii2: 4k4i I:329-385 [266527]
      Other proteins in same PDB: d4k4ia1, d4k4ia3, d4k4ia4, d4k4ie1, d4k4ie3, d4k4ie4, d4k4ii1, d4k4ii3, d4k4ii4, d4k4im1, d4k4im3, d4k4im4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1ry, act, ca, cac
    4. 1999712Domain d4k4im2: 4k4i M:329-385 [266530]
      Other proteins in same PDB: d4k4ia1, d4k4ia3, d4k4ia4, d4k4ie1, d4k4ie3, d4k4ie4, d4k4ii1, d4k4ii3, d4k4ii4, d4k4im1, d4k4im3, d4k4im4
      automated match to d2bcqa2
      protein/DNA complex; complexed with 1ry, act, ca, cac

More info for Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.60.12.1 DNA polymerase lambda: