Class a: All alpha proteins [46456] (290 folds) |
Fold a.60: SAM domain-like [47768] (17 superfamilies) 4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins |
Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) contains one classic and one pseudo HhH motifs |
Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins) |
Protein DNA polymerase lambda [101251] (1 species) |
Species Human (Homo sapiens) [TaxId:9606] [101252] (28 PDB entries) |
Domain d1nzpa_: 1nzp A: [92385] one (lyase) domain only protein/DNA complex |
Domain d1rzta1: 1rzt A:249-328 [98224] Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3 protein/DNA complex; complexed with edo, na |
Domain d1rzte1: 1rzt E:250-328 [98227] Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3 protein/DNA complex; complexed with edo, na |
Domain d1rzti1: 1rzt I:250-328 [98230] Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3 protein/DNA complex; complexed with edo, na |
Domain d1rztm1: 1rzt M:249-328 [98233] Other proteins in same PDB: d1rzta2, d1rzta3, d1rzte2, d1rzte3, d1rzti2, d1rzti3, d1rztm2, d1rztm3 protein/DNA complex; complexed with edo, na |
Domain d1xsla1: 1xsl A:249-327 [122270] Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3 automatically matched to d1nzpa_ protein/DNA complex; complexed with cac, mg, na |
Domain d1xsle1: 1xsl E:251-327 [122273] Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3 automatically matched to d1nzpa_ protein/DNA complex; complexed with cac, mg, na |
Domain d1xsli1: 1xsl I:250-327 [122276] Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3 automatically matched to d1nzpa_ protein/DNA complex; complexed with cac, mg, na |
Domain d1xslm1: 1xsl M:249-327 [122279] Other proteins in same PDB: d1xsla2, d1xsla3, d1xsle2, d1xsle3, d1xsli2, d1xsli3, d1xslm2, d1xslm3 automatically matched to d1nzpa_ protein/DNA complex; complexed with cac, mg, na |
Domain d1xsna1: 1xsn A:252-327 [122282] Other proteins in same PDB: d1xsna2, d1xsna3 automatically matched to d1nzpa_ protein/DNA complex; complexed with d3t, edo, mg, na |
Domain d1xspa1: 1xsp A:252-327 [122285] Other proteins in same PDB: d1xspa2, d1xspa3 automatically matched to d1nzpa_ protein/DNA complex; complexed with na, ppv |
Domain d2bcqa1: 2bcq A:252-328 [128304] Other proteins in same PDB: d2bcqa2, d2bcqa3 automated match to d1rzta1 protein/DNA complex; complexed with edo, mg, na, ppv |
Domain d2gwsa1: 2gws A:249-328 [135813] Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3 automated match to d1rzta1 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwse1: 2gws E:250-328 [135816] Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3 automated match to d1rzta1 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwsi1: 2gws I:250-328 [135819] Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3 automated match to d1rzta1 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2gwsm1: 2gws M:250-328 [135822] Other proteins in same PDB: d2gwsa2, d2gwsa3, d2gwse2, d2gwse3, d2gwsi2, d2gwsi3, d2gwsm2, d2gwsm3 automated match to d1rzta1 protein/DNA complex; complexed with cac, cl, edo, mg, na |
Domain d2pfna1: 2pfn A:251-328 [139672] Other proteins in same PDB: d2pfna2, d2pfna3 automated match to d1rzta1 protein/DNA complex; complexed with dup, mg, na |
Domain d2pfoa1: 2pfo A:253-328 [139675] Other proteins in same PDB: d2pfoa2, d2pfoa3 automated match to d1rzta1 protein/DNA complex; complexed with dup, edo, mg, mn, na |
Domain d2pfpa1: 2pfp A:250-328 [139678] Other proteins in same PDB: d2pfpa2, d2pfpa3 automated match to d1rzta1 protein/DNA complex; complexed with dcp, mg, na |
Domain d2pfqa1: 2pfq A:252-328 [139681] Other proteins in same PDB: d2pfqa2, d2pfqa3 automated match to d1rzta1 protein/DNA complex; complexed with dcp, mg, mn, na, ppv |
Domain d3c5fa1: 3c5f A:250-328 [155937] Other proteins in same PDB: d3c5fa2, d3c5fa3, d3c5fb2, d3c5fb3 automated match to d1rzta1 protein/DNA complex; complexed with na; mutant |
Domain d3c5fb1: 3c5f B:250-328 [155940] Other proteins in same PDB: d3c5fa2, d3c5fa3, d3c5fb2, d3c5fb3 automated match to d1rzta1 protein/DNA complex; complexed with na; mutant |
Domain d3c5ga1: 3c5g A:249-328 [155943] Other proteins in same PDB: d3c5ga2, d3c5ga3, d3c5gb2, d3c5gb3 automated match to d1rzta1 protein/DNA complex; complexed with d3t, edo, mg, na; mutant |
Domain d3c5gb1: 3c5g B:245-328 [155946] Other proteins in same PDB: d3c5ga2, d3c5ga3, d3c5gb2, d3c5gb3 automated match to d1rzta1 protein/DNA complex; complexed with d3t, edo, mg, na; mutant |
Domain d3hw8a1: 3hw8 A:249-328 [246598] Other proteins in same PDB: d3hw8a2, d3hw8a3 automated match to d1rzta1 protein/DNA complex; complexed with d3t, edo, mg, na |
Domain d3mdca1: 3mdc A:254-328 [247641] Other proteins in same PDB: d3mdca2, d3mdca3 automated match to d1rzta1 protein/DNA complex; complexed with gtf, mg, na |
Domain d3mgha1: 3mgh A:249-328 [247694] Other proteins in same PDB: d3mgha2, d3mgha3, d3mghc2, d3mghc3 automated match to d1rzta1 protein/DNA complex; complexed with na; mutant |
Domain d3mghc1: 3mgh C:250-328 [247697] Other proteins in same PDB: d3mgha2, d3mgha3, d3mghc2, d3mghc3 automated match to d1rzta1 protein/DNA complex; complexed with na; mutant |
Domain d3mgia1: 3mgi A:252-328 [247700] Other proteins in same PDB: d3mgia2, d3mgia3 automated match to d1rzta1 protein/DNA complex; complexed with d3t, mg, na; mutant |
Domain d3pmla1: 3pml A:249-328 [248521] Other proteins in same PDB: d3pmla2, d3pmla3, d3pmlb2, d3pmlb3 automated match to d1rzta1 protein/DNA complex; complexed with 1gc, mg, na |
Domain d3pmlb1: 3pml B:247-328 [248524] Other proteins in same PDB: d3pmla2, d3pmla3, d3pmlb2, d3pmlb3 automated match to d1rzta1 protein/DNA complex; complexed with 1gc, mg, na |
Domain d3pmna1: 3pmn A:249-328 [248527] Other proteins in same PDB: d3pmna2, d3pmna3 automated match to d1rzta1 protein/DNA complex; complexed with 1gc, cl, mg, mn, na |
Domain d3pnca1: 3pnc A:250-328 [248540] Other proteins in same PDB: d3pnca2, d3pnca3 automated match to d1rzta1 protein/DNA complex; complexed with 1gc, mg, na, trs |
Domain d3upqa1: 3upq A:252-328 [250248] Other proteins in same PDB: d3upqa2, d3upqa3 automated match to d1rzta1 protein/DNA complex; complexed with mn, na, so4, zan |
Domain d3uq0a1: 3uq0 A:251-328 [250252] Other proteins in same PDB: d3uq0a2, d3uq0a3 automated match to d1rzta1 protein/DNA complex; complexed with cl, edo, na, so4 |
Domain d3uq1a1: 3uq1 A:252-328 [306664] Other proteins in same PDB: d3uq1a2, d3uq1a3 automated match to d3hw8a1 protein/DNA complex; complexed with cl, f2a, mg, mn, na |
Domain d3uq2a1: 3uq2 A:253-328 [250255] Other proteins in same PDB: d3uq2a2, d3uq2a3 automated match to d1rzta1 protein/DNA complex; complexed with mg, na, ppv |
Domain d4fo6a1: 4fo6 A:252-328 [252040] Other proteins in same PDB: d4fo6a2, d4fo6a3 automated match to d1rzta1 protein/DNA complex; complexed with cl, f2a, mg, mn, na |
Domain d4k4ga1: 4k4g A:250-328 [257795] Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ga4, d4k4ge2, d4k4ge3, d4k4ge4, d4k4gi2, d4k4gi3, d4k4gi4, d4k4gm2, d4k4gm3, d4k4gm4 automated match to d1rzta1 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4ge1: 4k4g E:249-328 [257793] Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ga4, d4k4ge2, d4k4ge3, d4k4ge4, d4k4gi2, d4k4gi3, d4k4gi4, d4k4gm2, d4k4gm3, d4k4gm4 automated match to d1rzta1 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4gi1: 4k4g I:250-328 [262794] Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ga4, d4k4ge2, d4k4ge3, d4k4ge4, d4k4gi2, d4k4gi3, d4k4gi4, d4k4gm2, d4k4gm3, d4k4gm4 automated match to d3hw8a1 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4gm1: 4k4g M:249-328 [262797] Other proteins in same PDB: d4k4ga2, d4k4ga3, d4k4ga4, d4k4ge2, d4k4ge3, d4k4ge4, d4k4gi2, d4k4gi3, d4k4gi4, d4k4gm2, d4k4gm3, d4k4gm4 automated match to d3hw8a1 protein/DNA complex; complexed with 1s0, act, ca, cac |
Domain d4k4ha1: 4k4h A:249-328 [262800] Other proteins in same PDB: d4k4ha2, d4k4ha3, d4k4ha4, d4k4he2, d4k4he3, d4k4he4, d4k4hi2, d4k4hi3, d4k4hi4, d4k4hm2, d4k4hm3, d4k4hm4 automated match to d3hw8a1 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4he1: 4k4h E:249-328 [258917] Other proteins in same PDB: d4k4ha2, d4k4ha3, d4k4ha4, d4k4he2, d4k4he3, d4k4he4, d4k4hi2, d4k4hi3, d4k4hi4, d4k4hm2, d4k4hm3, d4k4hm4 automated match to d1rzta1 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4hi1: 4k4h I:249-328 [262803] Other proteins in same PDB: d4k4ha2, d4k4ha3, d4k4ha4, d4k4he2, d4k4he3, d4k4he4, d4k4hi2, d4k4hi3, d4k4hi4, d4k4hm2, d4k4hm3, d4k4hm4 automated match to d3hw8a1 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4hm1: 4k4h M:249-328 [262806] Other proteins in same PDB: d4k4ha2, d4k4ha3, d4k4ha4, d4k4he2, d4k4he3, d4k4he4, d4k4hi2, d4k4hi3, d4k4hi4, d4k4hm2, d4k4hm3, d4k4hm4 automated match to d3hw8a1 protein/DNA complex; complexed with 1rz, act, ca |
Domain d4k4ia1: 4k4i A:250-328 [266520] Other proteins in same PDB: d4k4ia2, d4k4ia3, d4k4ia4, d4k4ie2, d4k4ie3, d4k4ie4, d4k4ii2, d4k4ii3, d4k4ii4, d4k4im2, d4k4im3, d4k4im4 automated match to d3hw8a1 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4ie1: 4k4i E:249-328 [266523] Other proteins in same PDB: d4k4ia2, d4k4ia3, d4k4ia4, d4k4ie2, d4k4ie3, d4k4ie4, d4k4ii2, d4k4ii3, d4k4ii4, d4k4im2, d4k4im3, d4k4im4 automated match to d3hw8a1 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4ii1: 4k4i I:250-328 [266526] Other proteins in same PDB: d4k4ia2, d4k4ia3, d4k4ia4, d4k4ie2, d4k4ie3, d4k4ie4, d4k4ii2, d4k4ii3, d4k4ii4, d4k4im2, d4k4im3, d4k4im4 automated match to d3hw8a1 protein/DNA complex; complexed with 1ry, act, ca, cac |
Domain d4k4im1: 4k4i M:249-328 [266529] Other proteins in same PDB: d4k4ia2, d4k4ia3, d4k4ia4, d4k4ie2, d4k4ie3, d4k4ie4, d4k4ii2, d4k4ii3, d4k4ii4, d4k4im2, d4k4im3, d4k4im4 automated match to d3hw8a1 protein/DNA complex; complexed with 1ry, act, ca, cac |
Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.60.6.1 DNA polymerase lambda: