Lineage for Protein: Nickel responsive regulator NikR, N-terminal domain

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 641597Fold a.43: Ribbon-helix-helix [47597] (1 superfamily)
    core: 4 helices; array of 2 hairpins, opened
  4. 641598Superfamily a.43.1: Ribbon-helix-helix [47598] (8 families) (S)
    formerly Met repressor-like; dimeric proteins; the N-termini form a small beta-sheet ribbon
  5. 641641Family a.43.1.3: CopG-like [100970] (3 proteins)
    similar to the phage repressor family
  6. 641642Protein Nickel responsive regulator NikR, N-terminal domain [101205] (2 species)

Species:

  1. 641643Archaeon Pyrococcus horikoshii [TaxId:53953] [140543] (5 PDB entries)
    1. Domains for 2bj1:
      1. 641654Domain d2bj1a1: 2bj1 A:1-50 [128596]
        Other proteins in same PDB: d2bj1a2, d2bj1b2
        complexed with cl, ni
      2. 641655Domain d2bj1b1: 2bj1 B:1-50 [128598]
        Other proteins in same PDB: d2bj1a2, d2bj1b2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, ni
    2. Domains for 2bj3:
      1. 641648Domain d2bj3a1: 2bj3 A:1-50 [128600]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
      2. 641649Domain d2bj3b1: 2bj3 B:2-50 [128602]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
      3. 641650Domain d2bj3c1: 2bj3 C:1-50 [128604]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
      4. 641651Domain d2bj3d1: 2bj3 D:2-50 [128606]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, mg
    3. Domains for 2bj7:
      1. 641644Domain d2bj7a1: 2bj7 A:1-50 [128608]
        Other proteins in same PDB: d2bj7a2, d2bj7b2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, ni, pg4
      2. 641645Domain d2bj7b1: 2bj7 B:1-50 [128610]
        Other proteins in same PDB: d2bj7a2, d2bj7b2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, ni, pg4
    4. Domains for 2bj8:
      1. 641646Domain d2bj8a1: 2bj8 A:1-50 [128612]
        Other proteins in same PDB: d2bj8a2, d2bj8b2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, epe, ni, pg4
      2. 641647Domain d2bj8b1: 2bj8 B:1-50 [128614]
        Other proteins in same PDB: d2bj8a2, d2bj8b2
        automatically matched to 2BJ1 A:1-50
        complexed with cl, edo, epe, ni, pg4
    5. Domains for 2bj9:
      1. 641652Domain d2bj9a1: 2bj9 A:1-50 [128616]
        Other proteins in same PDB: d2bj9a2, d2bj9b2
        automatically matched to 2BJ1 A:1-50
        complexed with ni, pg4, po4
      2. 641653Domain d2bj9b1: 2bj9 B:1-50 [128618]
        Other proteins in same PDB: d2bj9a2, d2bj9b2
        automatically matched to 2BJ1 A:1-50
        complexed with ni, pg4, po4
  2. 641656Escherichia coli [TaxId:562] [101206] (3 PDB entries)
    1. Domains for 1q5v:
      1. 641659Domain d1q5va1: 1q5v A:1-48 [95937]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      2. 641660Domain d1q5vb1: 1q5v B:1-48 [95939]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      3. 641661Domain d1q5vc1: 1q5v C:1-48 [95941]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      4. 641662Domain d1q5vd1: 1q5v D:1-48 [95943]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
    2. Domains for 2hza:
      1. 641657Domain d2hzaa1: 2hza A:1-48 [136907]
        Other proteins in same PDB: d2hzaa2, d2hzab2
        automatically matched to d1q5va1
        complexed with 3cm, ni
      2. 641658Domain d2hzab1: 2hza B:1-43 [136909]
        Other proteins in same PDB: d2hzaa2, d2hzab2
        automatically matched to d1q5va1
        complexed with 3cm, ni
    3. Domains for 2hzv:
      1. 641663Domain d2hzva1: 2hzv A:1-48 [136916]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      2. 641664Domain d2hzvb1: 2hzv B:1-48 [136918]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      3. 641665Domain d2hzvc1: 2hzv C:1-48 [136920]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      4. 641666Domain d2hzvd1: 2hzv D:1-48 [136922]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      5. 641667Domain d2hzve1: 2hzv E:1-48 [136924]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      6. 641668Domain d2hzvf1: 2hzv F:1-48 [136926]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      7. 641669Domain d2hzvg1: 2hzv G:1-48 [136928]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni
      8. 641670Domain d2hzvh1: 2hzv H:1-48 [136930]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automatically matched to d1q5va1
        complexed with k, ni

More info for Protein Nickel responsive regulator NikR, N-terminal domain from a.43.1.3: CopG-like

Timeline for Protein Nickel responsive regulator NikR, N-terminal domain from a.43.1.3: CopG-like: