Lineage for Protein: Nickel responsive regulator NikR, N-terminal domain

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2321652Fold a.43: Ribbon-helix-helix [47597] (1 superfamily)
    core: 4 helices; array of 2 hairpins, opened
  4. 2321653Superfamily a.43.1: Ribbon-helix-helix [47598] (12 families) (S)
    formerly Met repressor-like; dimeric proteins; the N-termini form a small beta-sheet ribbon
  5. 2321695Family a.43.1.3: CopG-like [100970] (4 protein domains)
    similar to the phage repressor family
  6. 2321696Protein Nickel responsive regulator NikR, N-terminal domain [101205] (2 species)

Species:

  1. 2321697Escherichia coli [TaxId:562] [101206] (4 PDB entries)
    1. Domains for 1q5v:
      1. 2321700Domain d1q5va1: 1q5v A:1-48 [95937]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      2. 2321701Domain d1q5vb1: 1q5v B:1-48 [95939]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      3. 2321702Domain d1q5vc1: 1q5v C:1-48 [95941]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
      4. 2321703Domain d1q5vd1: 1q5v D:1-48 [95943]
        Other proteins in same PDB: d1q5va2, d1q5vb2, d1q5vc2, d1q5vd2
    2. Domains for 2hza:
      1. 2321698Domain d2hzaa1: 2hza A:1-48 [136907]
        Other proteins in same PDB: d2hzaa2, d2hzab2
        automated match to d1q5va1
        complexed with 3cm, ni
      2. 2321699Domain d2hzab1: 2hza B:1-43 [136909]
        Other proteins in same PDB: d2hzaa2, d2hzab2
        automated match to d1q5va1
        complexed with 3cm, ni
    3. Domains for 2hzv:
      1. 2321706Domain d2hzva1: 2hzv A:1-48 [136916]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      2. 2321707Domain d2hzvb1: 2hzv B:1-48 [136918]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      3. 2321708Domain d2hzvc1: 2hzv C:1-48 [136920]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      4. 2321709Domain d2hzvd1: 2hzv D:1-48 [136922]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      5. 2321710Domain d2hzve1: 2hzv E:1-48 [136924]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      6. 2321711Domain d2hzvf1: 2hzv F:1-48 [136926]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      7. 2321712Domain d2hzvg1: 2hzv G:1-48 [136928]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
      8. 2321713Domain d2hzvh1: 2hzv H:1-48 [136930]
        Other proteins in same PDB: d2hzva2, d2hzvb2, d2hzvc2, d2hzvd2, d2hzve2, d2hzvf2, d2hzvg2, d2hzvh2
        automated match to d2hzaa1
        protein/DNA complex; complexed with k, ni
    4. Domains for 3od2:
      1. 2321704Domain d3od2a1: 3od2 A:1-48 [214311]
        Other proteins in same PDB: d3od2a2, d3od2b2
        automated match to d1q5va1
        complexed with 3cm, ni
      2. 2321705Domain d3od2b1: 3od2 B:1-45 [214313]
        Other proteins in same PDB: d3od2a2, d3od2b2
        automated match to d1q5va1
        complexed with 3cm, ni
  2. 2321714Pyrococcus horikoshii [TaxId:53953] [140543] (4 PDB entries)
    Uniprot O58316 1-50
    1. Domain for 2bj1:
    2. Domains for 2bj3:
      1. 2321719Domain d2bj3a1: 2bj3 A:1-50 [128600]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automated match to d2bj1a1
        complexed with cl, mg
      2. 2321720Domain d2bj3b1: 2bj3 B:2-50 [128602]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automated match to d2bj1a1
        complexed with cl, mg
      3. 2321721Domain d2bj3c1: 2bj3 C:1-50 [128604]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automated match to d2bj1a1
        complexed with cl, mg
      4. 2321722Domain d2bj3d1: 2bj3 D:2-50 [128606]
        Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
        automated match to d2bj1a1
        complexed with cl, mg
    3. Domains for 2bj7:
      1. 2321715Domain d2bj7a1: 2bj7 A:1-50 [128608]
        Other proteins in same PDB: d2bj7a2, d2bj7b2
        automated match to d2bj1a1
        complexed with cl, edo, ni, pg4
      2. 2321716Domain d2bj7b1: 2bj7 B:1-50 [128610]
        Other proteins in same PDB: d2bj7a2, d2bj7b2
        automated match to d2bj1a1
        complexed with cl, edo, ni, pg4
    4. Domains for 2bj8:
      1. 2321717Domain d2bj8a1: 2bj8 A:1-50 [128612]
        Other proteins in same PDB: d2bj8a2, d2bj8b2
        automated match to d2bj1a1
        complexed with cl, edo, epe, ni, pg4
      2. 2321718Domain d2bj8b1: 2bj8 B:1-50 [128614]
        Other proteins in same PDB: d2bj8a2, d2bj8b2
        automated match to d2bj1a1
        complexed with cl, edo, epe, ni, pg4

More info for Protein Nickel responsive regulator NikR, N-terminal domain from a.43.1.3: CopG-like

Timeline for Protein Nickel responsive regulator NikR, N-terminal domain from a.43.1.3: CopG-like: