Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983102Family a.4.5.32: Lrp/AsnC-like transcriptional regulator N-terminal domain [68967] (4 protein domains)
    Swapped dimer with the "wing" C-terminal strands
    automatically mapped to Pfam PF13412
  6. 1983107Protein Putative transcriptional regulator PH1519 [101010] (1 species)
    archaeal feast/famine regulatory protein
  7. 1983108Species Pyrococcus horikoshii [TaxId:53953] [101011] (4 PDB entries)
    identical sequence to Pyrococcus sp. ot3 protein

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1ri7:
  2. Domain(s) for 2e1c:
  3. Domain(s) for 2zny:
    1. 1983119Domain d2znya1: 2zny A:25-84 [207900]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    2. 1983120Domain d2znyb1: 2zny B:25-84 [207902]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    3. 1983121Domain d2znyc1: 2zny C:25-84 [207904]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    4. 1983122Domain d2znyd1: 2zny D:25-84 [207906]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    5. 1983123Domain d2znye1: 2zny E:25-84 [207908]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    6. 1983124Domain d2znyf1: 2zny F:25-84 [207910]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    7. 1983125Domain d2znyg1: 2zny G:25-84 [207912]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
    8. 1983126Domain d2znyh1: 2zny H:25-84 [207914]
      Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
      automated match to d1ri7a1
      complexed with arg
  4. Domain(s) for 2znz:
    1. 1983110Domain d2znza1: 2znz A:25-84 [207916]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    2. 1983111Domain d2znzb1: 2znz B:25-84 [207918]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    3. 1983112Domain d2znzc1: 2znz C:27-84 [207920]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    4. 1983113Domain d2znzd1: 2znz D:25-84 [207922]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    5. 1983114Domain d2znze1: 2znz E:25-84 [207924]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    6. 1983115Domain d2znzf1: 2znz F:25-84 [207926]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    7. 1983116Domain d2znzg1: 2znz G:25-84 [207928]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys
    8. 1983117Domain d2znzh1: 2znz H:25-84 [207930]
      Other proteins in same PDB: d2znza2, d2znzb2, d2znzc2, d2znzd2, d2znze2, d2znzf2, d2znzg2, d2znzh2
      automated match to d1ri7a1
      complexed with lys

More info for Species Pyrococcus horikoshii [TaxId:53953] from a.4.5.32 Putative transcriptional regulator PH1519

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from a.4.5.32 Putative transcriptional regulator PH1519: