Lineage for Protein: DinB homolog (DBH)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2614248Fold d.240: Lesion bypass DNA polymerase (Y-family), little finger domain [100878] (1 superfamily)
    beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology
  4. 2614249Superfamily d.240.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100879] (2 families) (S)
  5. 2614250Family d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100880] (5 proteins)
  6. 2614251Protein DinB homolog (DBH) [100881] (3 species)

Species:

  1. 2614252Sulfolobus acidocaldarius [TaxId:2285] [160394] (3 PDB entries)
    1. Domain for 3bq0:
    2. Domain for 3bq1:
    3. Domain for 3bq2:
  2. 2614256Sulfolobus solfataricus [TaxId:2287] [100883] (2 PDB entries)
    1. Domains for 1k1q:
      1. 2614258Domain d1k1qa1: 1k1q A:240-344 [90382]
        Other proteins in same PDB: d1k1qa2, d1k1qb2
      2. 2614259Domain d1k1qb1: 1k1q B:240-344 [90384]
        Other proteins in same PDB: d1k1qa2, d1k1qb2
    2. Domain for 1k1s:
  3. 2614260Sulfolobus solfataricus, DNA polymerase IV [TaxId:2287] [100882] (35 PDB entries)
    1. Domain for 1jx4:
    2. Domain for 1jxl:
    3. Domain for 1n48:
    4. Domains for 1n56:
      1. 2614289Domain d1n56a1: 1n56 A:241-341 [91680]
        Other proteins in same PDB: d1n56a2, d1n56b2
        protein/DNA complex; complexed with atp, ca, mg
      2. 2614290Domain d1n56b1: 1n56 B:241-341 [91682]
        Other proteins in same PDB: d1n56a2, d1n56b2
        protein/DNA complex; complexed with atp, ca, mg
    5. Domain for 1pm0:
    6. Domain for 1ryr:
    7. Domains for 1rys:
      1. 2614267Domain d1rysa1: 1rys A:241-341 [98111]
        Other proteins in same PDB: d1rysa2, d1rysb2
        protein/DNA complex; complexed with atp, ca, edo, na
      2. 2614268Domain d1rysb1: 1rys B:241-341 [98113]
        Other proteins in same PDB: d1rysa2, d1rysb2
        protein/DNA complex; complexed with atp, ca, edo, na
    8. Domains for 1s0m:
      1. 2614299Domain d1s0ma1: 1s0m A:241-341 [98290]
        Other proteins in same PDB: d1s0ma2, d1s0mb2
        protein/DNA complex; complexed with bap, ca, dtp, mg
      2. 2614300Domain d1s0mb1: 1s0m B:241-341 [98292]
        Other proteins in same PDB: d1s0ma2, d1s0mb2
        protein/DNA complex; complexed with bap, ca, dtp, mg
    9. Domain for 1s0n:
    10. Domains for 1s0o:
      1. 2614272Domain d1s0oa1: 1s0o A:241-341 [98296]
        Other proteins in same PDB: d1s0oa2, d1s0ob2
        protein/DNA complex; complexed with ca, mg, ttp
      2. 2614273Domain d1s0ob1: 1s0o B:241-341 [98298]
        Other proteins in same PDB: d1s0oa2, d1s0ob2
        protein/DNA complex; complexed with ca, mg, ttp
    11. Domain for 1s10:
    12. Domains for 1s97:
      1. 2614283Domain d1s97a1: 1s97 A:241-341 [98742]
        Other proteins in same PDB: d1s97a2, d1s97b2, d1s97c2, d1s97d2
        protein/DNA complex; complexed with ca, dct
      2. 2614284Domain d1s97b1: 1s97 B:241-341 [98744]
        Other proteins in same PDB: d1s97a2, d1s97b2, d1s97c2, d1s97d2
        protein/DNA complex; complexed with ca, dct
      3. 2614285Domain d1s97c1: 1s97 C:241-341 [98746]
        Other proteins in same PDB: d1s97a2, d1s97b2, d1s97c2, d1s97d2
        protein/DNA complex; complexed with ca, dct
      4. 2614286Domain d1s97d1: 1s97 D:241-341 [98748]
        Other proteins in same PDB: d1s97a2, d1s97b2, d1s97c2, d1s97d2
        protein/DNA complex; complexed with ca, dct
    13. Domains for 1s9f:
      1. 2614262Domain d1s9fa1: 1s9f A:241-341 [118913]
        Other proteins in same PDB: d1s9fa2, d1s9fb2, d1s9fc2, d1s9fd2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, ddy, mg
      2. 2614263Domain d1s9fb1: 1s9f B:241-341 [118915]
        Other proteins in same PDB: d1s9fa2, d1s9fb2, d1s9fc2, d1s9fd2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, ddy, mg
      3. 2614264Domain d1s9fc1: 1s9f C:241-341 [118917]
        Other proteins in same PDB: d1s9fa2, d1s9fb2, d1s9fc2, d1s9fd2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, ddy, mg
      4. 2614265Domain d1s9fd1: 1s9f D:241-341 [118919]
        Other proteins in same PDB: d1s9fa2, d1s9fb2, d1s9fc2, d1s9fd2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, ddy, mg
    14. Domain for 2ago:
    15. Domains for 2agp:
      1. 2614310Domain d2agpa1: 2agp A:241-341 [126731]
        Other proteins in same PDB: d2agpa2, d2agpb2
        automatically matched to d1n48a1
        protein/DNA complex; complexed with ca, dgt, mg
      2. 2614311Domain d2agpb1: 2agp B:241-341 [126733]
        Other proteins in same PDB: d2agpa2, d2agpb2
        automatically matched to d1n48a1
        protein/DNA complex; complexed with ca, dgt, mg
    16. Domain for 2agq:
    17. Domains for 2asd:
      1. 2614269Domain d2asda1: 2asd A:241-341 [127248]
        Other proteins in same PDB: d2asda2, d2asda3, d2asdb2, d2asdb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, dcp
      2. 2614270Domain d2asdb1: 2asd B:1241-1341 [127250]
        Other proteins in same PDB: d2asda2, d2asda3, d2asdb2, d2asdb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, dcp
    18. Domains for 2asj:
      1. 2614295Domain d2asja1: 2asj A:241-341 [127254]
        Other proteins in same PDB: d2asja2, d2asja3, d2asjb2, d2asjb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca
      2. 2614296Domain d2asjb1: 2asj B:1241-1341 [127256]
        Other proteins in same PDB: d2asja2, d2asja3, d2asjb2, d2asjb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca
    19. Domains for 2asl:
      1. 2614305Domain d2asla1: 2asl A:241-341 [127258]
        Other proteins in same PDB: d2asla2, d2asla3, d2aslb2, d2aslb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca
      2. 2614306Domain d2aslb1: 2asl B:1241-1341 [127260]
        Other proteins in same PDB: d2asla2, d2asla3, d2aslb2, d2aslb3
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca
    20. Domains for 2ia6:
      1. 2614287Domain d2ia6a2: 2ia6 A:241-341 [204761]
        Other proteins in same PDB: d2ia6a1, d2ia6b1
        automated match to d1jx4a1
        protein/DNA complex; complexed with atp, bap, ca, edo, gol, po4
      2. 2614288Domain d2ia6b2: 2ia6 B:241-341 [204763]
        Other proteins in same PDB: d2ia6a1, d2ia6b1
        automated match to d1jx4a1
        protein/DNA complex; complexed with atp, bap, ca, edo, gol, po4
    21. Domain for 2ibk:
    22. Domain for 2imw:
    23. Domain for 2r8g:
    24. Domain for 2r8h:
    25. Domain for 2r8i:
    26. Domain for 2rdi:
    27. Domains for 2rdj:
      1. 2614303Domain d2rdja1: 2rdj A:241-341 [151930]
        Other proteins in same PDB: d2rdja2, d2rdjb2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, gol, tmp
      2. 2614304Domain d2rdjb1: 2rdj B:241-341 [151932]
        Other proteins in same PDB: d2rdja2, d2rdjb2
        automated match to d1jx4a1
        protein/DNA complex; complexed with ca, gol, tmp
    28. Domain for 3fds:
    29. Domain for 3pr4:
    30. Domain for 3qz7:
    31. Domain for 3qz8:
    32. Domain for 4juz:
    33. Domain for 4jv0:
    34. Domain for 4jv1:
    35. Domain for 4jv2:

More info for Protein DinB homolog (DBH) from d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain

Timeline for Protein DinB homolog (DBH) from d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain: