SCOPe 2.06: Domain d1vk4a1: 1vk4 A:1-281

Lineage for d1vk4a1 (1vk4 A:1-281)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
   automatically mapped to Pfam PF00294

6. Protein Hypothetical protein TM0415 [102641] (1 species)

7. Species Thermotoga maritima [TaxId:2336] [102642] (1 PDB entry)

8. Domain d1vk4a1: 1vk4 A:1-281 [100850]
   Other proteins in same PDB: d1vk4a2
   structural genomics

Details for d1vk4a1

PDB Entry: 1vk4, 1.91 Å

PDB Description: Crystal structure of PfkB Carbohydrate kinase (TM0415) from Thermotoga maritima at 1.91 A resolution

PDB Compounds: (A:) PfkB Carbohydrate kinase TM0415

SCOPe Domain Sequences for d1vk4a1:

Sequence, based on SEQRES records:

>d1vk4a1 c.72.1.1 (A:1-281) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]}
mitfighvskdvnvvdgkreiaygggvvmgaitssllgvktkvitkctredvskfsflrd
ngvevvflksprttsienrygsdpdtresflisaadpftesdlafiegeavhinplwyge
fpedlipvlrrkvmflsadaqgfvrvpeneklvyrdwemkekylkyldlfkvdsreaetl
tgtndlrescriirsfgakiilathasgvivfdgnfyeasfrswslegrtgrgdtctaaf
lvgfvfkkmsiekatkfaaavtsvkmrhpgplrredleais

Sequence, based on observed residues (ATOM records):

>d1vk4a1 c.72.1.1 (A:1-281) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]}
mitfighvskdvnvvdgkreiaygggvvmgaitssllgvktkvitkctredvskfsflrd
ngvevvflksprttsienrytresflisaadpftesdlafiegeavhinplwygefpedl
ipvlrrkvmflsadaqgfvrvpeneklvyrdwemkekylkyldlfkvdsreaetltgtnd
lrescriirsfgakiilathasgvivfdgnfyeasfrswslegrtgrgdtctaaflvgfv
fkkmsiekatkfaaavtsvkmrhpgplrredleais

Timeline for d1vk4a1:

• d1vk4a1 first appeared in SCOP 1.67, called d1vk4a_
  
• d1vk4a1 was called d1vk4a_ in SCOPe 2.05
  
• d1vk4a1 appears in SCOPe 2.07
  
• d1vk4a1 appears in the current release, SCOPe 2.08