SCOPe 2.05: Domain d1vj7b2: 1vj7 B:197-370

Lineage for d1vj7b2 (1vj7 B:197-370)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)

5. Family d.218.1.8: RelA/SpoT domain [102945] (3 proteins)
   Pfam PF04607; ppGpp-synthetase

6. Protein Stringent response-like protein RelA domain 2 [102946] (1 species)

7. Species Streptococcus equisimilis [TaxId:119602] [102947] (1 PDB entry)

8. Domain d1vj7b2: 1vj7 B:197-370 [100804]
   Other proteins in same PDB: d1vj7a1, d1vj7b1
   complexed with gdp, gpx, mn

Details for d1vj7b2

PDB Entry: 1vj7, 2.1 Å

PDB Description: Crystal structure of the bifunctional catalytic fragment of RelSeq, the RelA/SpoT homolog from Streptococcus equisimilis.

PDB Compounds: (B:) Bifunctional RELA/SPOT

SCOPe Domain Sequences for d1vj7b2:

Sequence, based on SEQRES records:

>d1vj7b2 d.218.1.8 (B:197-370) Stringent response-like protein RelA domain 2 {Streptococcus equisimilis [TaxId: 119602]}
etefykishmmnekrrerealvddivtkiksytteqglfgdvygrpkhiysiyrkmrdkk
krfdqifdliaircvmetqsdvyamvgyihelwrpmpgrfkdyiaapkangyqsihttvy
gpkgpieiqirtkemhqvaeygvaahwaykkgvrgkvnqaeqkvgmnwikelve

Sequence, based on observed residues (ATOM records):

>d1vj7b2 d.218.1.8 (B:197-370) Stringent response-like protein RelA domain 2 {Streptococcus equisimilis [TaxId: 119602]}
etefykishmmneklvddivtkiksytteqglfgdvygrpkhiysiyrkmrifdliairc
vmetqsdvyamvgyihelwrpmpgrfkdyiaapkangyqsihttvygpkgpieiqirtke
mhqvaeygvawikelve

Timeline for d1vj7b2:

• d1vj7b2 first appeared in SCOP 1.67
  
• d1vj7b2 appears in SCOPe 2.04
  
• d1vj7b2 appears in SCOPe 2.06
  
• d1vj7b2 appears in the current release, SCOPe 2.08