SCOPe 2.08: Domain d1vizb1: 1viz B:2-226

Lineage for d1vizb1 (1viz B:2-226)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein PcrB protein homolog YerE [102046] (2 species)
   provisional classification; it is not known whether this protein binds FMN or not

7. Species Bacillus subtilis [TaxId:1423] [102047] (5 PDB entries)

8. Domain d1vizb1: 1viz B:2-226 [100785]
   Other proteins in same PDB: d1viza2, d1vizb2
   structural genomics
   complexed with na

Details for d1vizb1

PDB Entry: 1viz, 1.85 Å

PDB Description: crystal structure of an hypothetical protein

PDB Compounds: (B:) PcrB protein homolog

SCOPe Domain Sequences for d1vizb1:

Sequence, based on SEQRES records:

>d1vizb1 c.1.4.1 (B:2-226) PcrB protein homolog YerE {Bacillus subtilis [TaxId: 1423]}
ydvtewkhvfkldpnkdlpdeqleilcesgtdaviiggsdgvtednvlrmmskvrrflvp
cvlevsaieaivpgfdlyfipsvlnsknadwivgmhqkamkeygelmsmeeivaegycia
npdckaaalteadadlnmddivayarvsellqlpifyleysgvlgdieavkktkavlets
tlfygggikdaetakqyaehadvivvgnavyedfdralktvaavk

Sequence, based on observed residues (ATOM records):

>d1vizb1 c.1.4.1 (B:2-226) PcrB protein homolog YerE {Bacillus subtilis [TaxId: 1423]}
ydvtewkhvfkldpnkdlpdeqleilcesgtdaviiggdnvlrmmskvrrflvpcvlevs
aieaivpgfdlyfipsvlnsknadwivgmhqkamkeygelmsmeeivaegycianpdcka
aalteadadlnmddivayarvsellqlpifyleysgvlgdieavkktkavletstlfygg
gikdaetakqyaehadvivvgnavyedfdralktvaavk

Timeline for d1vizb1:

• d1vizb1 first appeared in SCOP 1.67, called d1vizb_
  
• d1vizb1 appears in SCOPe 2.07