SCOPe 2.08: Domain d1viqb1: 1viq B:1-207

Lineage for d1viqb1 (1viq B:1-207)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.113: Nudix [55810] (1 superfamily)
   beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
   contains beta-grasp motif

4. Superfamily d.113.1: Nudix [55811] (8 families)

5. Family d.113.1.1: MutT-like [55812] (17 proteins)

6. Protein ADP-ribose pyrophosphatase [64365] (4 species)

7. Species Escherichia coli [TaxId:562] [64366] (5 PDB entries)

8. Domain d1viqb1: 1viq B:1-207 [100767]
   Other proteins in same PDB: d1viqa2, d1viqb2
   structural genomics
   has additional subdomain(s) that are not in the common domain

Details for d1viqb1

PDB Entry: 1viq, 2.4 Å

PDB Description: crystal structure of putative adp ribose pyrophosphatase

PDB Compounds: (B:) ADP-ribose pyrophosphatase

SCOPe Domain Sequences for d1viqb1:

Sequence, based on SEQRES records:

>d1viqb1 d.113.1.1 (B:1-207) ADP-ribose pyrophosphatase {Escherichia coli [TaxId: 562]}
lkpdnlpvtfgkndveiiaretlyrgfssldlyrfrhrlfngqmshevrreiferghaav
llpfdpvrdevvlieqiriaaydtsetpwllemvagmieegesvedvarreaieeagliv
krtkpvlsflaspggtserssimvgevdattasgihgladenedirvhvvsreqayqwve
egkidnaasvialqwlqlhhqalknew

Sequence, based on observed residues (ATOM records):

>d1viqb1 d.113.1.1 (B:1-207) ADP-ribose pyrophosphatase {Escherichia coli [TaxId: 562]}
lkpdnlpvtfgkndveiiaretlyrgfssldlyrfrhrlfngqmshevrreiferghaav
llpfdpvrdevvlieqiriaaydtsetpwllemvagmieegesvedvarreaieeagliv
krtkpvlsflaspggtserssimvgevdattasgihdirvhvvsreqayqwveegkidna
asvialqwlqlhhqalknew

Timeline for d1viqb1:

• d1viqb1 first appeared in SCOP 1.67, called d1viqb_
  
• d1viqb1 appears in SCOPe 2.07