Lineage for d1vicb_ (1vic B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133681Family c.68.1.13: Cytidylytransferase [68901] (7 protein domains)
  6. 2133724Protein CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase [64143] (3 species)
  7. 2133747Species Haemophilus influenzae [TaxId:727] [102607] (2 PDB entries)
  8. 2133749Domain d1vicb_: 1vic B: [100757]
    Other proteins in same PDB: d1vica2
    structural genomics

Details for d1vicb_

PDB Entry: 1vic (more details), 1.8 Å

PDB Description: crystal structure of cmp-kdo synthetase
PDB Compounds: (B:) 3-deoxy-manno-octulosonate cytidylyltransferase

SCOPe Domain Sequences for d1vicb_:

Sequence, based on SEQRES records: (download)

>d1vicb_ c.68.1.13 (B:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}
sftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaksf
gaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfnv
nmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnlqdvqkvqlsda
ylrhigiyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdta
edlekvrailaan

Sequence, based on observed residues (ATOM records): (download)

>d1vicb_ c.68.1.13 (B:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}
sftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaksf
gaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfnv
nmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnkvqlsdaylrhi
giyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdtaedlek
vrailaan

SCOPe Domain Coordinates for d1vicb_:

Click to download the PDB-style file with coordinates for d1vicb_.
(The format of our PDB-style files is described here.)

Timeline for d1vicb_: