SCOPe 2.08: Domain d1vi1a1: 1vi1 A:2-333

Lineage for d1vi1a1 (1vi1 A:2-333)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
   consists of two intertwined (sub)domains related by pseudo dyad; duplication
   3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families)
   the constituent families form similar dimers

5. Family c.77.1.4: PlsX-like [102660] (1 protein)
   Pfam PF02504; contains extra beta-alpha unit between strands 2 and 3; closer relationships to the PdxA-like and phosphotransacetylase families

6. Protein Fatty acid/phospholipid synthesis protein PlsX [102661] (2 species)

7. Species Bacillus subtilis [TaxId:1423] [102662] (1 PDB entry)

8. Domain d1vi1a1: 1vi1 A:2-333 [100724]
   Other proteins in same PDB: d1vi1a2, d1vi1b2
   structural genomics

Details for d1vi1a1

PDB Entry: 1vi1, 2.95 Å

PDB Description: Crystal structure of a fatty acid/phospholipid synthesis protein

PDB Compounds: (A:) Fatty acid/phospholipid synthesis protein plsX

SCOPe Domain Sequences for d1vi1a1:

Sequence, based on SEQRES records:

>d1vi1a1 c.77.1.4 (A:2-333) Fatty acid/phospholipid synthesis protein PlsX {Bacillus subtilis [TaxId: 1423]}
riavdamggdhapkavidgvikgieafddlhitlvgdkttieshltttsdritvlhadev
ieptdepvravrrkknssmvlmaqevaenradacisagntgalmtaglfivgrikgidrp
alaptlptvsgdgfllldvganvdakpehlvqyaimgsvysqqvrgvtsprvgllnvgte
dkkgneltkqtfqilketaninfignveardllddvadvvvtdgftgnvtlktlegsals
ifkmmrdvmtstltsklaaavlkpklkemkmkmeysnyggaslfglkapvikahgssdsn
avfrairqaremvsqnvaaliqeevkeektde

Sequence, based on observed residues (ATOM records):

>d1vi1a1 c.77.1.4 (A:2-333) Fatty acid/phospholipid synthesis protein PlsX {Bacillus subtilis [TaxId: 1423]}
riavdamggdhapkavidgvikgieafddlhitlvgdkttieshltttsdritvlhadev
ieptdepvravrrkknssmvlmaqevaenradacisagntgalmtaglfivgrikgidrp
alaptlptvsgdgfllldvganvdakpehlvqyaimgsvysqqvrgvtsprvgllnvgte
dkkgneltkqtfqilketaninfignveardllddvadvvvtdgftgnvtlktlegsals
ifkmmrdvmtstlvlkpklkemkmkmeysnyggaslfglkapvikahgssdsnavfrair
qaremvsqnvaaliqeevkeektde

Timeline for d1vi1a1:

• d1vi1a1 first appeared in SCOP 1.67, called d1vi1a_
  
• d1vi1a1 appears in SCOPe 2.07