Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies) core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops |
Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest |
Family c.56.5.4: Bacterial dinuclear zinc exopeptidases [53204] (18 proteins) |
Protein Succinyl-diaminopimelate desuccinylase, catalytic domain [102509] (1 species) |
Species Neisseria meningitidis [TaxId:487] [102510] (1 PDB entry) |
Domain d1vgya1: 1vgy A:2-180,A:294-376 [100620] Other proteins in same PDB: d1vgya2, d1vgyb2 structural genomics |
PDB Entry: 1vgy (more details), 1.9 Å
SCOPe Domain Sequences for d1vgya1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} tetqslelakelisrpsvtpddrdcqklmaerlhkigfaaeemhfgntkniwlrrgtkap vvcfaghtdvvptgpvekwdsppfepaerdgrlygrgaadmktsiacfvtacerfvakhp nhqgsiallitsdeegdaldgttkvvdvlkardelidycivgeptavdklgdmikngrrX pfltqagkltdvaraaiaetcgieaelsttggtsdgrfikamaqelielgpsnatihqin envrlndipklsavyegilvrll
Timeline for d1vgya1: