SCOPe 2.07: Domain d1vgxb_: 1vgx B:

Lineage for d1vgxb_ (1vgx B:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
   core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta

4. Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families)
   Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues

5. Family d.185.1.2: Autoinducer-2 production protein LuxS [64294] (2 proteins)
   contains additional N-terminal strand; possible relationships to the putative editing domain of ThrRS (d.67.1)
   automatically mapped to Pfam PF02664

6. Protein Autoinducer-2 production protein LuxS [64295] (5 species)
   S-ribosylhomocysteinase

7. Species Deinococcus radiodurans [TaxId:1299] [64297] (5 PDB entries)

8. Domain d1vgxb_: 1vgx B: [100619]
   structural genomics
   complexed with zn

Details for d1vgxb_

PDB Entry: 1vgx, 1.9 Å

PDB Description: crystal structure of a autoinducer-2 synthesis protein

PDB Compounds: (B:) S-ribosylhomocysteinase

SCOPe Domain Sequences for d1vgxb_:

Sequence; same for both SEQRES and ATOM records:

>d1vgxb_ d.185.1.2 (B:) Autoinducer-2 production protein LuxS {Deinococcus radiodurans [TaxId: 1299]}
nvesfdldhtkvkapyvrlagvkttpkgdqiskydlrflqpnqgaidpaaihtlehllag
ymrdhlegvvdvspmgcrtgmymavigepdeqgvmkafeaalkdtaghdqpipgvselec
gnyrdhdlaaarqhardvldqglkvqetill

Timeline for d1vgxb_:

• d1vgxb_ first appeared in SCOP 1.67
  
• d1vgxb_ appears in SCOPe 2.06
  
• d1vgxb_ appears in the current release, SCOPe 2.08