Lineage for d1vgxb_ (1vgx B:)

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 422251Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. 422252Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (2 families) (S)
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
  5. 422402Family d.185.1.2: Autoinducer-2 production protein LuxS [64294] (1 protein)
    contains additional N-terminal strand; possible relationships to the putative editing domain of ThrRS (d.67.1)
  6. 422403Protein Autoinducer-2 production protein LuxS [64295] (4 species)
    S-ribosylhomocysteinase
  7. 422409Species Deinococcus radiodurans [TaxId:1299] [64297] (5 PDB entries)
  8. 422415Domain d1vgxb_: 1vgx B: [100619]
    structural genomics
    complexed with zn

Details for d1vgxb_

PDB Entry: 1vgx (more details), 1.9 Å

PDB Description: crystal structure of a autoinducer-2 synthesis protein

SCOP Domain Sequences for d1vgxb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vgxb_ d.185.1.2 (B:) Autoinducer-2 production protein LuxS {Deinococcus radiodurans}
nvesfdldhtkvkapyvrlagvkttpkgdqiskydlrflqpnqgaidpaaihtlehllag
ymrdhlegvvdvspmgartgmymavigepdeqgvmkafeaalkdtaghdqpipgvselec
gnyrdhdlaaarqhardvldqglkvqetill

SCOP Domain Coordinates for d1vgxb_:

Click to download the PDB-style file with coordinates for d1vgxb_.
(The format of our PDB-style files is described here.)

Timeline for d1vgxb_: