SCOPe 2.08: Domain d1vgvc1: 1vgv C:2-373

Lineage for d1vgvc1 (1vgv C:2-373)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.3: UDP-N-acetylglucosamine 2-epimerase [53763] (2 proteins)
   automatically mapped to Pfam PF02350

6. Protein UDP-N-acetylglucosamine 2-epimerase [53764] (3 species)

7. Species Escherichia coli [TaxId:562] [53765] (2 PDB entries)

8. Domain d1vgvc1: 1vgv C:2-373 [100610]
   Other proteins in same PDB: d1vgva2, d1vgvb2, d1vgvc2, d1vgvd2
   structural genomics
   complexed with ud1

Details for d1vgvc1

PDB Entry: 1vgv, 2.31 Å

PDB Description: crystal structure of udp-n-acetylglucosamine_2 epimerase

PDB Compounds: (C:) udp-n-acetylglucosamine 2-epimerase

SCOPe Domain Sequences for d1vgvc1:

Sequence, based on SEQRES records:

>d1vgvc1 c.87.1.3 (C:2-373) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
kvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlnim
qpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveaglr
tgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwvr
dqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiqi
vypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapslg
kpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgqa
csrilealknnr

Sequence, based on observed residues (ATOM records):

>d1vgvc1 c.87.1.3 (C:2-373) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
kvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlnig
qglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveaglrtgd
lyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwvrdqv
mssdklrselaanypfidpdkkmilvtghrfgrgfeeichaladiatthqdiqivypvhl
npnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapslgkpvlvm
rdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgqacsrile
alknnr

Timeline for d1vgvc1:

• d1vgvc1 first appeared in SCOP 1.67, called d1vgvc_
  
• d1vgvc1 appears in SCOPe 2.07