SCOPe 2.04: Domain d1v9pa2: 1v9p A:318-403

Lineage for d1v9pa2 (1v9p A:318-403)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain [50307] (5 proteins)

6. Protein NAD+-dependent DNA ligase [50313] (1 species)

7. Species Thermus filiformis [TaxId:276] [50314] (2 PDB entries)

8. Domain d1v9pa2: 1v9p A:318-403 [100545]
   Other proteins in same PDB: d1v9pa1, d1v9pa3, d1v9pb1, d1v9pb3
   complexed with amp, zn

Details for d1v9pa2

PDB Entry: 1v9p, 2.9 Å

PDB Description: Crystal Structure Of Nad+-Dependent DNA Ligase

PDB Compounds: (A:) DNA ligase

SCOPe Domain Sequences for d1v9pa2:

Sequence; same for both SEQRES and ATOM records:

>d1v9pa2 b.40.4.6 (A:318-403) NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
aeeketrlldvvfqvgrtgrvtpvgvlepvfiegsevsrvtlhnesyieeldirigdwvl
vhkaggvipevlrvlkerrtgeerpi

Timeline for d1v9pa2:

• d1v9pa2 first appeared in SCOP 1.67
  
• d1v9pa2 appears in SCOPe 2.03
  
• d1v9pa2 appears in SCOPe 2.05
  
• d1v9pa2 appears in the current release, SCOPe 2.08