Class a: All alpha proteins [46456] (289 folds) |
Fold a.60: SAM domain-like [47768] (16 superfamilies) 4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins |
Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) duplication: contains two helix-hairpin-helix (HhH) motifs |
Family a.60.2.2: NAD+-dependent DNA ligase, domain 3 [47786] (1 protein) |
Protein NAD+-dependent DNA ligase, domain 3 [47787] (1 species) duplication: consists of two RuvA-like domains (four HhH motifs); also contains a zinc-finger subdomain |
Species Thermus filiformis [TaxId:276] [47788] (3 PDB entries) |
Domain d1v9pa1: 1v9p A:404-584 [100544] Other proteins in same PDB: d1v9pa2, d1v9pa3, d1v9pb2, d1v9pb3 complexed with amp, zn |
PDB Entry: 1v9p (more details), 2.9 Å
SCOPe Domain Sequences for d1v9pa1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1v9pa1 a.60.2.2 (A:404-584) NAD+-dependent DNA ligase, domain 3 {Thermus filiformis [TaxId: 276]} rwpetcpecghrlvkegkvhrcpnplcpakrfeairhyasrkamdieglgeklierllek glvrdvadlyhlrkedllglermgeksaqnllrqieeskhrglerllyalglpgvgevla rnlarrfgtmdrlleasleelleveevgeltarailetlkdpafrdlvrrlkeagvsmes k
Timeline for d1v9pa1: