SCOPe 2.08: Domain d1uynx_: 1uyn X:

Lineage for d1uynx_ (1uyn X:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)
   annotated by the SCOP(e) curators as 'not a true fold'

4. Superfamily f.4.5: Autotransporter [103515] (1 family)
   forms (12,14) barrel; contains a long alpha-helix running along the barrel axis
   automatically mapped to Pfam PF03797

5. Family f.4.5.1: Autotransporter [103516] (1 protein)

6. Protein Translocator domain of NalP [103517] (1 species)

7. Species Neisseria meningitidis [TaxId:487] [103518] (2 PDB entries)

8. Domain d1uynx_: 1uyn X: [100174]
   complexed with cxe, so4

Details for d1uynx_

PDB Entry: 1uyn, 2.6 Å

PDB Description: translocator domain of autotransporter nalp from neisseria meningitidis

PDB Compounds: (X:) nalp

SCOPe Domain Sequences for d1uynx_:

Sequence, based on SEQRES records:

>d1uynx_ f.4.5.1 (X:) Translocator domain of NalP {Neisseria meningitidis [TaxId: 487]}
aatvyadstaahadmqgrrlkavsdgldhngtglrviaqtqqdggtweqggvegkmrgst
qtvgiaaktgenttaaatlgmgrstwsensanaktdsislfagirhdagdigylkglfsy
gryknsisrstgadehaegsvngtlmqlgalggvnvpfaatgdltvegglrydllkqdaf
aekgsalgwsgnsltegtlvglaglklsqplsdkavlfatagverdlngrdytvtggftg
ataatgktgarnmphtrlvaglgadvefgngwnglarysyagskqygnhsgrvgvgyrf

Sequence, based on observed residues (ATOM records):

>d1uynx_ f.4.5.1 (X:) Translocator domain of NalP {Neisseria meningitidis [TaxId: 487]}
aatvyadstaahadmqgrrlkavsdgldhngtglrviaqtqqdggtweqggvegkmrgst
qtvgiaaktgenttaaatlgmgrstwsensanaktdsislfagirhdagdigylkglfsy
gryknsisrstgadehaegsvngtlmqlgalggvnvptgdltvegglrydllkqdafaek
gsalgwsgnsltegtlvglaglklsqplsdkavlfatagverdlngrdytvtgphtrlva
glgadvefgngwnglarysyagskqygnhsgrvgvgyrf

Timeline for d1uynx_:

• d1uynx_ first appeared in SCOP 1.67
  
• d1uynx_ appears in SCOPe 2.07