SCOPe 2.08: Domain d1uumb_: 1uum B:

Lineage for d1uumb_ (1uum B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Dihydroorotate dehydrogenase [51397] (8 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [102039] (2 PDB entries)

8. Domain d1uumb_: 1uum B: [100011]
   complexed with afi, bog, fmn, oro
   has additional subdomain(s) that are not in the common domain
   has additional insertions and/or extensions that are not grouped together

Details for d1uumb_

PDB Entry: 1uum, 2.3 Å

PDB Description: rat dihydroorotate dehydrogenase (dhod)in complex with atovaquone

PDB Compounds: (B:) dihydroorotate dehydrogenase

SCOPe Domain Sequences for d1uumb_:

Sequence, based on SEQRES records:

>d1uumb_ c.1.4.1 (B:) Dihydroorotate dehydrogenase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
yaeylmpglqrlldpesahrlavrvtslgllpratfqdsdmlevkvlghkfrnpvgiaag
fdkngeavdglyklgfgfvevgsvtpqpqegnprprvfrlpedqavinrygfnshglsvv
ehrlrarqqkqaqltadglplginlgknktsedaaadyaegvrtlgpladylvvnvsspn
taglrslqgktelrhllskvlqerdalkgtrkpavlvkiapdltaqdkediasvarelgi
dglivtnttvsrpvglqgalrsetgglsgkplrdlstqtiremyaltqgripiigvggvs
sgqdalekiqagaslvqlytaliflgppvvvrvkreleallkergfttvtdaigadhrr

Sequence, based on observed residues (ATOM records):

>d1uumb_ c.1.4.1 (B:) Dihydroorotate dehydrogenase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
yaeylmpglqrlldpesahrlavrvtslgllpratfqdsdmlevkvlghkfrnpvgiaag
fdkngeavdglyklgfgfvevgsvtpqpqegnprprvfrlpedqavinrygfnshglsvv
ehrlrarqqkqaqltadglplginlgknktsedaaadyaegvrtlgpladylvvnvssqg
ktelrhllskvlqerdalkgtrkpavlvkiapdltaqdkediasvarelgidglivtntt
vsrpvglqgalrsetgglsgkplrdlstqtiremyaltqgripiigvggvssgqdaleki
qagaslvqlytaliflgppvvvrvkreleallkergfttvtdaigadhrr

Timeline for d1uumb_:

• d1uumb_ first appeared in SCOP 1.67
  
• d1uumb_ appears in SCOPe 2.07