Lineage for d5lpta_ (5lpt A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2448538Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2448539Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
  6. 2448550Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2448579Species Zymomonas mobilis [TaxId:542] [51716] (156 PDB entries)
    Uniprot P28720
  8. 2448743Domain d5lpta_: 5lpt A: [338613]
    automated match to d1q2ra_
    protein/RNA complex; complexed with 726, gol, zn

Details for d5lpta_

PDB Entry: 5lpt (more details), 2.36 Å

PDB Description: trna guanine transglycosylase (tgt) in co-crystallized complex (space group p21) with 6-amino-2-(methylamino)-4-(2-((2r,3r,4s,5r,6s)-3,4,5, 6-tetramethoxytetrahydro-2h-pyran-2-yl)ethyl)-1h-imidazo[4,5- g]quinazolin-8(7h)-one
PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d5lpta_:

Sequence, based on SEQRES records: (download)

>d5lpta_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfarns

Sequence, based on observed residues (ATOM records): (download)

>d5lpta_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaagadiilgntyhlmlrpgaer
iaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldgsrhmlspersie
iqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiq
qgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgv
gkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechcav
cqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryf
arns

SCOPe Domain Coordinates for d5lpta_:

Click to download the PDB-style file with coordinates for d5lpta_.
(The format of our PDB-style files is described here.)

Timeline for d5lpta_: