Lineage for d5ibkc_ (5ibk C:)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. Protein Ubiquitin [54238] (9 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [54239] (309 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. Domain d5ibkc_: 5ibk C: [315443]
    Other proteins in same PDB: d5ibka1, d5ibka2, d5ibka3, d5ibkd1, d5ibkd2
    automated match to d4k1rb_

Details for d5ibkc_

PDB Entry: 5ibk (more details), 2.5 Å

PDB Description: skp1-f-box in complex with a ubiquitin variant
PDB Compounds: (C:) Polyubiquitin-B

SCOPe Domain Sequences for d5ibkc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ibkc_ d.15.1.1 (C:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
gsmqifvktgartaitlevepsdtienvkakiqdkegippdqqilifsrklledgrtlsd
ynihrestlrlvlifr

SCOPe Domain Coordinates for d5ibkc_ are not available.

Timeline for d5ibkc_:

View in 3D
Domains from other chains:
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d5ibka1, d5ibka2, d5ibka3, d5ibkd1, d5ibkd2, d5ibkf_