Lineage for d4u62a_ (4u62 A:)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
  6. Protein automated matches [191200] (13 species)
    not a true protein
  7. Species Trichodysplasia spinulosa-associated polyomavirus [TaxId:862909] [275642] (6 PDB entries)
  8. Domain d4u62a_: 4u62 A: [275657]
    Other proteins in same PDB: d4u62d2, d4u62f2
    automated match to d4mbzj_
    complexed with edo, gol, sia

Details for d4u62a_

PDB Entry: 4u62 (more details), 1.55 Å

PDB Description: trichodysplasia spinulosa-associated polyomavirus (tspyv) vp1 in complex with 3'-sialyllactose
PDB Compounds: (A:) Structural protein VP1

SCOPe Domain Sequences for d4u62a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4u62a_ b.121.6.1 (A:) automated matches {Trichodysplasia spinulosa-associated polyomavirus [TaxId: 862909]}

SCOPe Domain Coordinates for d4u62a_ are not available.

Timeline for d4u62a_:

View in 3D
Domains from other chains:
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d4u62b_, d4u62c_, d4u62d1, d4u62d2, d4u62e_, d4u62f1, d4u62f2, d4u62g_, d4u62h_, d4u62i_, d4u62j_