Lineage for d4n5db_ (4n5d B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1837112Fold c.17: Caspase-like [52128] (1 superfamily)
    3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest
  4. 1837113Superfamily c.17.1: Caspase-like [52129] (3 families) (S)
    mature protein may be composed of two chains folded in a single domain
  5. 1837284Family c.17.1.0: automated matches [191651] (1 protein)
    not a true family
  6. 1837285Protein automated matches [191201] (1 species)
    not a true protein
  7. 1837286Species Human (Homo sapiens) [TaxId:9606] [189525] (14 PDB entries)
  8. 1837302Domain d4n5db_: 4n5d B: [229925]
    automated match to d3s8eg_
    complexed with 2fq, mpd, po4

Details for d4n5db_

PDB Entry: 4n5d (more details), 2.06 Å

PDB Description: Tailoring Small Molecules for an Allosteric Site on Procaspase-6: Cpd1
PDB Compounds: (B:) Caspase-6

SCOPe Domain Sequences for d4n5db_:

Sequence, based on SEQRES records: (download)

>d4n5db_ c.17.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mfdpaekykmdhrrrgialifnherffwhltlperrgtcadrdnltrrfsdlgfevkcfn
dlkaeelllkihevstvshadadcfvcvflshgegnhiyaydakieiqtltglfkgdkch
slvgkpkifiiqaargnqhdvpvipldvvdnqtekldtnitevdaasvytlpagadflmc
ysvaegyyshretvngswyiqdlcemlgkygssleftelltlvnrkvsqrrvdfckdpsa
igkkqvpcfasmltkklhffpk

Sequence, based on observed residues (ATOM records): (download)

>d4n5db_ c.17.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mfdpaekykmdhrrrgialifnherffwhltlperrgtcadrdnltrrfsdlgfevkcfn
dlkaeelllkihevstvshadadcfvcvflshgegnhiyaydakieiqtltglfkgdkch
slvgkpkifiiqaargnqtnitevdaasvytlpagadflmcysvaegyyshretvngswy
iqdlcemlgkygssleftelltlvnrkvsqrrvdfckdpsaigkkqvpcfasmltkklhf
fpk

SCOPe Domain Coordinates for d4n5db_:

Click to download the PDB-style file with coordinates for d4n5db_.
(The format of our PDB-style files is described here.)

Timeline for d4n5db_: