Lineage for d4j5xc_ (4j5x C:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2728284Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2728285Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2728286Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. 2729635Protein automated matches [190059] (14 species)
    not a true protein
  7. 2729657Species Human (Homo sapiens) [TaxId:9606] [187214] (171 PDB entries)
  8. 2729915Domain d4j5xc_: 4j5x C: [223561]
    automated match to d1lbda_
    complexed with srl

Details for d4j5xc_

PDB Entry: 4j5x (more details), 2.8 Å

PDB Description: crystal structure of the sr12813-bound pxr/rxralpha lbd heterotetramer complex
PDB Compounds: (C:) Retinoic acid receptor RXR-alpha, Nuclear receptor coactivator 1

SCOPe Domain Sequences for d4j5xc_:

Sequence, based on SEQRES records: (download)

>d4j5xc_ a.123.1.1 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
edmpverileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewakrip
hfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifd
rvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhk
ypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleaphqmtggsgg
sshsslterhkilhrllqe

Sequence, based on observed residues (ATOM records): (download)

>d4j5xc_ a.123.1.1 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
edmpverileaelavepktetyveanmglpndpvtnicqaadkqlftlvewakriphfse
lplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvlt
elvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeq
pgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleaprhkilhrllqe

SCOPe Domain Coordinates for d4j5xc_:

Click to download the PDB-style file with coordinates for d4j5xc_.
(The format of our PDB-style files is described here.)

Timeline for d4j5xc_: