Lineage for d4ikza_ (4ikz A:)

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3028261Fold f.38: MFS general substrate transporter [103472] (1 superfamily)
    12 transmembrane helices; duplication: the N- and C-terminal halves are structurally similar
  4. 3028262Superfamily f.38.1: MFS general substrate transporter [103473] (5 families) (S)
  5. 3028282Family f.38.1.3: Proton-dependent oligopeptide transporter (POT or PTR2) / nitrate transporter NRT1 family [310629] (2 proteins)
    Pfam PF00854; microbial members have 2 additional helices between H6 and H7
  6. 3028283Protein Microbial PepT or POT [310739] (3 species)
  7. 3028284Species Geobacillus kaustophilus [TaxId:1462] [310992] (5 PDB entries)
  8. 3028289Domain d4ikza_: 4ikz A: [307542]
    complexed with afs, so4; mutant

Details for d4ikza_

PDB Entry: 4ikz (more details), 2.4 Å

PDB Description: crystal structure of peptide transporter pot (e310q mutant) in complex with alafosfalin
PDB Compounds: (A:) Di-tripeptide ABC transporter (Permease)

SCOPe Domain Sequences for d4ikza_:

Sequence, based on SEQRES records: (download)

>d4ikza_ f.38.1.3 (A:) Microbial PepT or POT {Geobacillus kaustophilus [TaxId: 1462]}
sidkqqiaasvpqrgffghpkglftlfftefwerfsyygmrailvyymyyevskgglgld
ehlalaimsiygalvymsgiiggwladrvfgtsravfyggllimaghialaipggvaalf
vsmalivlgtgllkpnvssivgdmykpgddrrdagfsifymginlgaflaplvvgtagmk
ynfhlgfglaavgmflglvvfvatrkknlglagtyvpnpltpaekkkaaaimavgavvia
vllailipngwftvetfislvgilgiiipiiyfvvmyrspkttaeersrviayiplfvas
amfwaiqqqgstilanyadkrtqldvagihlspawfqslnplfiiilapvfawmwvklgk
rqptipqkfalgllfaglsfivilvpghlsggglvhpiwlvlsyfivvlgelclspvgls
attklapaafsaqtmslwflsnaaaqainaqlvrfytpenetayfgtiggaalvlglill
aiaprigrlmkg

Sequence, based on observed residues (ATOM records): (download)

>d4ikza_ f.38.1.3 (A:) Microbial PepT or POT {Geobacillus kaustophilus [TaxId: 1462]}
sidkqqiaasvpqrgffghpkglftlfftefwerfsyygmrailvyymyyevskgglgld
ehlalaimsiygalvymsgiiggwladrvfgtsravfyggllimaghialaipggvaalf
vsmalivlgtgllkpnvssivgdmykpgddrrdagfsifymginlgaflaplvvgtagmk
ynfhlgfglaavgmflglvvfvatrkknlglagtyvpnpltpaekkkaaaimavgavvia
vllaftvetfislvgilgiiipiiyfvvmyrspkttaeersrviayiplfvasamfwaiq
qqgstilanyadkrtqldvagihlspawfqslnplfiiilapvfawmwvklgkrqptipq
kfalgllfaglsfivilvpghlsggglvhpiwlvlsyfivvlgelclspvglsattklap
aafsaqtmslwflsnaaaqainaqlvrfytpenetayfgtiggaalvlglillaiaprig
rlmkg

SCOPe Domain Coordinates for d4ikza_:

Click to download the PDB-style file with coordinates for d4ikza_.
(The format of our PDB-style files is described here.)

Timeline for d4ikza_: