Lineage for d4fm8a_ (4fm8 A:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1796116Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 1796117Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 1797457Family b.50.1.2: Pepsin-like [50646] (11 proteins)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 1797514Protein beta-secretase (memapsin) [50671] (1 species)
  7. 1797515Species Human (Homo sapiens) [TaxId:9606] [50672] (258 PDB entries)
    Uniprot P56817 58-446 ! Uniprot P56817 60-447
  8. 1797637Domain d4fm8a_: 4fm8 A: [194599]
    automated match to d2qk5a_
    complexed with 0uq, edo, zn

Details for d4fm8a_

PDB Entry: 4fm8 (more details), 1.9 Å

PDB Description: Crystal Structure of BACE with Compound 12a
PDB Compounds: (A:) Beta-secretase 1

SCOPe Domain Sequences for d4fm8a_:

Sequence, based on SEQRES records: (download)

>d4fm8a_ b.50.1.2 (A:) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
fvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqrqlss
tyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsnwegi
lglayaeiarpddslepffdslvkqthvpnlfslqlcgagfplnqsevlasvggsmiigg
idhslytgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnlrlpk
kvfeaavksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnqsfri
tilpqqylrpvedvatsqddcykfaisqsstgtvmgavimegfyvvfdrarkrigfavsa
chvhdefrtaavegpfvtldmedcgynipqtdesrshhhh

Sequence, based on observed residues (ATOM records): (download)

>d4fm8a_ b.50.1.2 (A:) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
fvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqrqlss
tyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsnwegi
lglayaeiarpddslepffdslvkqthvpnlfslqlcgasevlasvggsmiiggidhsly
tgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnlrlpkkvfeaa
vksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnqsfritilpqq
ylrpvedvatsqddcykfaisqsstgtvmgavimegfyvvfdrarkrigfavsachvhde
frtaavegpfvtldmedcgynipqtdesrshhhh

SCOPe Domain Coordinates for d4fm8a_:

Click to download the PDB-style file with coordinates for d4fm8a_.
(The format of our PDB-style files is described here.)

Timeline for d4fm8a_: