Lineage for d4dkna_ (4dkn A:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2546826Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2546827Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2547682Family d.22.1.0: automated matches [191400] (1 protein)
    not a true family
  6. 2547683Protein automated matches [190526] (25 species)
    not a true protein
  7. 2547743Species Branchiostoma floridae [TaxId:7739] [226665] (5 PDB entries)
  8. 2547754Domain d4dkna_: 4dkn A: [219841]
    automated match to d2c9ja_

Details for d4dkna_

PDB Entry: 4dkn (more details), 1.35 Å

PDB Description: crystal structure of amphioxus green fluorescent protein, gfpa1
PDB Compounds: (A:) amphioxus green fluorescent protein, gfpa1

SCOPe Domain Sequences for d4dkna_:

Sequence, based on SEQRES records: (download)

>d4dkna_ d.22.1.0 (A:) automated matches {Branchiostoma floridae [TaxId: 7739]}
plpathdihlhgsinghefdmvgggkgdpnagslvttakstkgalkfspylmiphlgygy
yqylpypdgpspfqvsmlegsgyavyrvfdfedggklstefkysyegshikadmklmgsg
fpddgpvmtsqivdqdgcvskktylnnntivdsfdwsynlqngkryrarvsshyifdkpf
sadlmkkqpvfvyrkchvkatktevtlderekafyela

Sequence, based on observed residues (ATOM records): (download)

>d4dkna_ d.22.1.0 (A:) automated matches {Branchiostoma floridae [TaxId: 7739]}
plpathdihlhgsinghefdmvgggkgdpnagslvttakstkgalkfspylmiphlgygy
yqylpypdgpspfqvsmlegsgyavyrvfdfedggklstefkysyegshikadmklmgsg
fpddgpvmtsqivdqdgcvskktylnnntivdsfdwsynlqngkryrarvsshyifdkpf
kqpvfvyrkchvkatktevtlderekafyela

SCOPe Domain Coordinates for d4dkna_:

Click to download the PDB-style file with coordinates for d4dkna_.
(The format of our PDB-style files is described here.)

Timeline for d4dkna_:

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Domains from other chains:
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d4dknb_