Lineage for d3rd1b_ (3rd1 B:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1845072Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1845073Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1845934Family c.37.1.8: G proteins [52592] (79 proteins)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 1846955Protein automated matches [190047] (27 species)
    not a true protein
  7. 1846991Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [196360] (1 PDB entry)
  8. 1846993Domain d3rd1b_: 3rd1 B: [196361]
    automated match to d3aq4a_
    complexed with gdp, mg

Details for d3rd1b_

PDB Entry: 3rd1 (more details), 1.8 Å

PDB Description: structure of an adp ribosylation factor from entamoeba histolytica hm- 1:imss bound to mg-gdp
PDB Compounds: (B:) ADP-ribosylation factor

SCOPe Domain Sequences for d3rd1b_:

Sequence, based on SEQRES records: (download)

>d3rd1b_ c.37.1.8 (B:) automated matches {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}
swlskllgkkemrilmvgldaagktsilyklklgeivttiptigfnvetveyknisftvw
dvggqdkirplwrhyyqntqaiifvvdsndrdrigeareelmkmlnedemrnaillvfan
khdlpqamsisevteklglqtiknrkwycqtscatngdglyegldwladnl

Sequence, based on observed residues (ATOM records): (download)

>d3rd1b_ c.37.1.8 (B:) automated matches {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}
swlskllgkkemrilmvgldaagktsilyklklgeivttiptigfnvetveyknisftvw
dvggyqntqaiifvvdsndrdrigeareelmkmlnedemrnaillvfankhdlpqamsis
evteklglqtiknrkwycqtscatngdglyegldwladnl

SCOPe Domain Coordinates for d3rd1b_:

Click to download the PDB-style file with coordinates for d3rd1b_.
(The format of our PDB-style files is described here.)

Timeline for d3rd1b_: