Lineage for d3lkfa_ (3lkf A:)

  1. Root: SCOPe 2.07
  2. 2626587Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2628131Fold f.6: Leukocidin-like [56958] (1 superfamily)
    subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
  4. 2628132Superfamily f.6.1: Leukocidin-like [56959] (3 families) (S)
  5. 2628133Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
    heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit
    automatically mapped to Pfam PF07968
  6. 2628211Protein Leukocidin F (HlgB) [56965] (1 species)
  7. 2628212Species Staphylococcus aureus [TaxId:1280] [56966] (3 PDB entries)
  8. 2628213Domain d3lkfa_: 3lkf A: [43820]
    complexed with pc

Details for d3lkfa_

PDB Entry: 3lkf (more details), 1.9 Å

PDB Description: leukocidin f (hlgb) from staphylococcus aureus with phosphocholine bound
PDB Compounds: (A:) leukocidin f subunit

SCOPe Domain Sequences for d3lkfa_:

Sequence, based on SEQRES records: (download)

>d3lkfa_ f.6.1.1 (A:) Leukocidin F (HlgB) {Staphylococcus aureus [TaxId: 1280]}
egkitpvsvkkvddkvtlykttatadsdkfkisqiltfnfikdksydkdtlvlkatgnin
sgfvkpnpndydfsklywgakynvsissqsndsvnvvdyapknqneefqvqntlgytfgg
disisnglsgglngntafsetinykqesyrttlsrntnyknvgwgveahkimnngwgpyg
rdsfhptygnelflagrqssayagqnfiaqhqmpllsrsnfnpeflsvlshrqdgakksk
itvtyqremdlyqirwngfywaganyknfktrtfkstyeidwenhkvklldtketennk

Sequence, based on observed residues (ATOM records): (download)

>d3lkfa_ f.6.1.1 (A:) Leukocidin F (HlgB) {Staphylococcus aureus [TaxId: 1280]}
egkitpvsvkkvddkvtlykttatadsdkfkisqiltfnfikdksydkdtlvlkatgnin
sgfvkpnpndydfsklywgakynvsissqsndsvnvvdyapknqneefqvqntlgytfgg
disisngltafsetinykqesyrttlsrntnyknvgwgveahkimnngwgpygrdsfhpt
ygnelflagrqssayagqnfiaqhqmpllsrsnfnpeflsvlshrqdgakkskitvtyqr
emdlyqirwngfywaganyknfktrtfkstyeidwenhkvklldtketennk

SCOPe Domain Coordinates for d3lkfa_:

Click to download the PDB-style file with coordinates for d3lkfa_.
(The format of our PDB-style files is described here.)

Timeline for d3lkfa_: