Lineage for d3ckpa_ (3ckp A:)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1320913Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 1320914Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 1322142Family b.50.1.2: Pepsin-like [50646] (11 proteins)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 1322829Protein automated matches [190156] (4 species)
    not a true protein
  7. 1322854Species Human (Homo sapiens) [TaxId:9606] [187237] (36 PDB entries)
  8. 1322889Domain d3ckpa_: 3ckp A: [156740]
    automated match to d1fkna_
    complexed with 012, cl

Details for d3ckpa_

PDB Entry: 3ckp (more details), 2.3 Å

PDB Description: crystal structure of bace-1 in complex with inhibitor
PDB Compounds: (A:) Beta-secretase 1

SCOPe Domain Sequences for d3ckpa_:

Sequence, based on SEQRES records: (download)

>d3ckpa_ b.50.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
kkgsfvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqr
qlsstyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsn
wegilglayaeiarpddslepffdslvkqthvpnlfslqlcgagfplnqsevlasvggsm
iiggidhslytgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnl
rlpkkvfeaavksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnq
sfritilpqqylrpvedvatsqddcykfaisqsstgtvmgavimegfyvvfdrarkrigf
avsachvhdefrtaavegpfvtldmedcgyni

Sequence, based on observed residues (ATOM records): (download)

>d3ckpa_ b.50.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
kkgsfvemvdnlrgksgqgyyvemtvgsppqtlnilvdtgssnfavgaaphpflhryyqr
qlsstyrdlrkgvyvpytqgkwegelgtdlvsiphgpnvtvraniaaitesdkffingsn
wegilglayaeiarpddslepffdslvkqthvpnlfslqlcgagasvggsmiiggidhsl
ytgslwytpirrewyyeviivrveingqdlkmdckeynydksivdsgttnlrlpkkvfea
avksikaasstekfpdgfwlgeqlvcwqagttpwnifpvislylmgevtnqsfritilpq
qylrpvesqddcykfaisqsstgtvmgavimegfyvvfdrarkrigfavsachvhdefrt
aavegpfvtldmedcgyni

SCOPe Domain Coordinates for d3ckpa_:

Click to download the PDB-style file with coordinates for d3ckpa_.
(The format of our PDB-style files is described here.)

Timeline for d3ckpa_: