Lineage for d2zfya_ (2zfy A:)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1398964Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 1398965Superfamily d.3.1: Cysteine proteinases [54001] (23 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 1399697Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 1399698Protein automated matches [190230] (14 species)
    not a true protein
  7. 1399710Species Human (Homo sapiens) [TaxId:9606] [187072] (29 PDB entries)
  8. 1399719Domain d2zfya_: 2zfy A: [171201]
    automated match to d1tffa_

Details for d2zfya_

PDB Entry: 2zfy (more details), 1.69 Å

PDB Description: Crystal structure of human Otubain 1
PDB Compounds: (A:) Ubiquitin thioesterase OTUB1

SCOPe Domain Sequences for d2zfya_:

Sequence, based on SEQRES records: (download)

>d2zfya_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nplvserlelsvlykeyaeddniyqqkikdlhkkysyirktrpdgncfyrafgfshleal
lddskelqrfkavsakskedlvsqgfteftiedfhntfmdlieqvekqtsvadllasfnd
qstsdylvvylrlltsgylqreskffehfieggrtvkefcqqevepmckesdhihiiala
qalsvsiqveymdrgeggttnphifpegsepkvyllyrpghydilyk

Sequence, based on observed residues (ATOM records): (download)

>d2zfya_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nplvserlelsvlykeyaeddniyqqkikdlhkkysyirktrpdgncfyrafgfshleal
lddskelqrfkavsakskedlvsqgfteftiedfhntfmdlieqvekqtsvadllasfnd
qstsdylvvylrlltsgylqreskffehfieggrtvkefcqqevepmckesdhihiiala
qalsvsiqveymdgeggttnphifpegsepkvyllyrpghydilyk

SCOPe Domain Coordinates for d2zfya_:

Click to download the PDB-style file with coordinates for d2zfya_.
(The format of our PDB-style files is described here.)

Timeline for d2zfya_: