Lineage for d2r88a_ (2r88 A:)

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3021955Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
    annotated by the SCOP(e) curators as 'not a true fold'
  4. 3022096Superfamily f.4.3: Porins [56935] (5 families) (S)
  5. 3022343Family f.4.3.4: Outer membrane protein transport protein [111361] (2 proteins)
    Pfam PF03349; monomeric (14,16) barrel; plugged by an N-terminal all-alpha subdomain (1-40)
  6. 3022350Protein automated matches [190968] (2 species)
    not a true protein
  7. 3022360Species Escherichia coli [TaxId:562] [188604] (3 PDB entries)
  8. 3022361Domain d2r88a_: 2r88 A: [168006]
    automated match to d1t16a_
    mutant

Details for d2r88a_

PDB Entry: 2r88 (more details), 2.6 Å

PDB Description: Crystal structure of the long-chain fatty acid transporter FadL mutant delta S3 kink
PDB Compounds: (A:) Long-chain fatty acid transport protein

SCOPe Domain Sequences for d2r88a_:

Sequence, based on SEQRES records: (download)

>d2r88a_ f.4.3.4 (A:) automated matches {Escherichia coli [TaxId: 562]}
fqlnefsssglgraysgegaiaddagnvsrnpalitmfdrptfsagavyidpdvnisgts
psgrslkadniaptawvpnmhfvapindqfgwgasitandlatefndtyaggsvggttdl
etmnlnlsgayrlnnawsfglgfnavyarakierfagdlgqlvagqimqspagqtqqgqa
laatangidsntktahlngnqwgfgwnagilyeldknnryaltyrsevkidfkgnyssdl
nrafnnyglpiptatggatqsgyltlnlpemwevsgynrvdpqwaihyslaytswsqfqq
lkatstsgdtlfqkhegfkdayrialgttyyyddnwtfrtgiafddspvpaqnrsisipd
qdrfwlsagttyafnkdasvdvgvsymhgqsvkinegpyqfesegkawlfgtnfnyaf

Sequence, based on observed residues (ATOM records): (download)

>d2r88a_ f.4.3.4 (A:) automated matches {Escherichia coli [TaxId: 562]}
fqlnefsssglgraysgegaiaddagnvsrnpalitmfdrptfsagavyidpdvnisgts
psgrslkadniaptawvpnmhfvapindqfgwgasitandlatefndtyaggsvggttdl
etmnlnlsgayrlnnawsfglgfnavyarakierfagdlgqlvagqimqspagqtqqgqa
laatangidsntktahlngnqwgfgwnagilyeldknnryaltyrsevkidfkgtlnlpe
mwevsgynrvdpqwaihyslaytswkdayrialgttyyyddnwtfrtgiafddspvpaqn
rsisipdqdrfwlsagttyafnkdasvdvgvsymhgqsvkinegpyqfesegkawlfgtn
fnyaf

SCOPe Domain Coordinates for d2r88a_:

Click to download the PDB-style file with coordinates for d2r88a_.
(The format of our PDB-style files is described here.)

Timeline for d2r88a_:

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Domains from other chains:
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d2r88b_