Lineage for d2py5a2 (2py5 A:188-575)
- Root: SCOPe 2.08
Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) 
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all membersSuperfamily e.8.1: DNA/RNA polymerases [56672] (9 families) 
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domainFamily e.8.1.1: DNA polymerase I [56673] (5 proteins)
in the multi-domain class (e), this applies to domains with different numbers of (sub)domains than the most common domain
Protein phi29 DNA polymerase [118193] (1 species) Species Bacteriophage phi-29 [TaxId:10756] [118194] (8 PDB entries)
Uniprot P03680
Domain d2py5a2: 2py5 A:188-575 [149929]
Other proteins in same PDB: d2py5a1, d2py5b1
automated match to d1xhxa2
protein/DNA complex; complexed with edo
Details for d2py5a2
PDB Entry: 2py5 (more details), 1.6 Å
PDB Description: phi29 dna polymerase complexed with single-stranded dna
PDB Compounds: (A:) DNA polymeraseSCOPe Domain Sequences for d2py5a2:
Sequence, based on SEQRES records: (download)
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]}
mtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeigegmv
fdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqikrs
rfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkw
tyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeeetkdpvyt
pmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywahes
tfkrakylrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikkevtfenfk
vgfsrkmkpkpvqvpggvvlvddtftik
Sequence, based on observed residues (ATOM records): (download)
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]}
mtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeigegmv
fdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqigne
ylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfidkwtyiktts
egaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeeetkdpvytpmgvfit
awaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywahestfkraky
lrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikkevtfenfkvgfsrkm
kpkpvqvpggvvlvddtftik
SCOPe Domain Coordinates for d2py5a2:
Click to download the PDB-style file with coordinates for d2py5a2.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d2py5a2:
- d2py5a2 first appeared in SCOP 1.75
- d2py5a2 appears in SCOPe 2.07
View in 3D
