Lineage for d2okca1 (2okc A:9-433)
- Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the restSuperfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families) 
Family c.66.1.45: N-6 DNA Methylase-like [142606] (3 proteins)
Pfam PF02384; contains C-terminal extension to the canonical fold and extra N-terminal all-alpha domain similar to the insert domain of the DAM family (88788)
Protein Type I restriction enzyme StySJI M protein [159684] (1 species) Species Bacteroides thetaiotaomicron [TaxId:818] [159685] (1 PDB entry)
Uniprot Q89Z59 9-433
Domain d2okca1: 2okc A:9-433 [148801]
complexed with cl, gol, ipa, sam
Details for d2okca1
PDB Entry: 2okc (more details), 2.2 Å
PDB Description: crystal structure of type i restriction enzyme stysji m protein (np_813429.1) from bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution
PDB Compounds: (A:) Type I restriction enzyme StySJI M proteinSCOPe Domain Sequences for d2okca1:
Sequence, based on SEQRES records: (download)
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
qsltkkvwnlattlagqgigftdyitqltyllflkmdaenvemfgeesaiptgyqwadli
afdgldlvkqyeetlkllseldnligtiytkaqnkidkpvylkkvitmideeqwlimdgd
vkgaiyesilekngqdkksgagqyftprpliqamvdcinpqmgetvcdpacgtggfllta
ydymkgqsaskekrdflrdkalhgvdntplvvtlasmnlylhgigtdrspivcedsleke
pstlvdvilanppfgtrpagsvdinrpdfyvetknnqlnflqhmmlmlktggraavvlpd
nvlfeagagetirkrllqdfnlhtilrlptgifyaqgvkanvlffskgqptkeiwfydyr
tdikhtlatnklerhhlddfvscynnrveiydaennpqgrwrkypvdeiiardktsldit
wikpg
Sequence, based on observed residues (ATOM records): (download)
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]}
qsltkkvwnlattlagqgigftdyitqltyllflkmdaenvemfgeesaiptgyqwadli
afdgldlvkqyeetlkllseldnligtiytkaqnkidkpvylkkvitmideeqwlimdgd
vkgaiyesilekngqdkksgagqyftprpliqamvdcinpqmgetvcdpacgtggfllta
ydymkgqsskekrdflrdkalhgvdntplvvtlasmnlylhgigtdrspivcedslekep
stlvdvilanppfgtrpagsvdinrpdfyvetknnqlnflqhmmlmlktggraavvlpdn
vlfeagagetirkrllqdfnlhtilrlptgifyaqgvkanvlffskgqptkeiwfydyrt
dikhtlatnklerhhlddfvscynnrveiydaennpqgrwrkypvdeiiardktslditw
ikpg
SCOPe Domain Coordinates for d2okca1:
Click to download the PDB-style file with coordinates for d2okca1.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d2okca1:
- d2okca1 first appeared in SCOP 1.75
- d2okca1 appears in SCOPe 2.07
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