Lineage for d2o6vd1 (2o6v D:301-376)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1637451Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1637452Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1637453Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1637639Protein Ubiquitin [54238] (7 species)
  7. 1637706Species Human (Homo sapiens) [TaxId:9606] [54239] (126 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1637817Domain d2o6vd1: 2o6v D:301-376 [145715]
    Other proteins in same PDB: d2o6vb_, d2o6vf_
    complexed with mes, so4

Details for d2o6vd1

PDB Entry: 2o6v (more details), 2.2 Å

PDB Description: crystal structure and solution nmr studies of lys48-linked tetraubiquitin at neutral ph
PDB Compounds: (D:) Ubiquitin

SCOPe Domain Sequences for d2o6vd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2o6vd1 d.15.1.1 (D:301-376) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
iqrestlhlvlrlrgg

SCOPe Domain Coordinates for d2o6vd1:

Click to download the PDB-style file with coordinates for d2o6vd1.
(The format of our PDB-style files is described here.)

Timeline for d2o6vd1: