Lineage for d2o05a1 (2o05 A:15-300)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2892669Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2892670Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families) (S)
  5. 2893343Family c.66.1.17: Spermidine synthase [69557] (3 proteins)
    contains additional N-terminal tetramerisation all-beta domain, res. 1-71
  6. 2893348Protein Spermidine synthase [69558] (6 species)
    polyamine aminopropyltransferase
  7. 2893354Species Human (Homo sapiens) [TaxId:9606] [142590] (5 PDB entries)
    Uniprot P19623 15-300
  8. 2893361Domain d2o05a1: 2o05 A:15-300 [138858]
    complexed with mta

Details for d2o05a1

PDB Entry: 2o05 (more details), 2 Å

PDB Description: Human spermidine synthase
PDB Compounds: (A:) spermidine synthase

SCOPe Domain Sequences for d2o05a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2o05a1 c.66.1.17 (A:15-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
airegwfretcslwpgqalslqveqllhhrrsryqdilvfrsktygnvlvldgviqcter
defsyqemianlplcshpnprkvliigggdggvlrevvkhpsvesvvqceidedviqvsk
kflpgmaigyssskltlhvgdgfefmkqnqdafdviitdssdpmgpaeslfkesyyqlmk
talkedgvlccqgecqwlhldlikemrqfcqslfpvvayayctiptypsgqigfmlcskn
pstnfqepvqpltqqqvaqmqlkyynsdvhraafvlpefarkalnd

SCOPe Domain Coordinates for d2o05a1:

Click to download the PDB-style file with coordinates for d2o05a1.
(The format of our PDB-style files is described here.)

Timeline for d2o05a1:

2893361
d2o05a1 in context of PDB
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Domains from other chains:
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d2o05b_