Lineage for d2i2sa_ (2i2s A:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1779936Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 1779937Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 1781626Family b.29.1.14: vp4 sialic acid binding domain [74907] (2 proteins)
    automatically mapped to Pfam PF00426
  6. 1781635Protein automated matches [190699] (2 species)
    not a true protein
  7. 1781643Species Rotavirus c [TaxId:10913] [187837] (1 PDB entry)
  8. 1781644Domain d2i2sa_: 2i2s A: [165375]
    automated match to d1kqra_
    complexed with gol, mna, mpd, na, so4

Details for d2i2sa_

PDB Entry: 2i2s (more details), 2.3 Å

PDB Description: crystal structure of the porcine crw-8 rotavirus vp8* carbohydrate- recognising domain
PDB Compounds: (A:) Outer capsid protein VP4

SCOPe Domain Sequences for d2i2sa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i2sa_ b.29.1.14 (A:) automated matches {Rotavirus c [TaxId: 10913]}
gslldgpyqpttfnpptsywillaptvegvviqgtnnidrwlatiliepnvqttnriynl
fgqqvtlsventsqtqwkfidvskttptgnytqhgslfstpklyavmkfsgriytyngtt
pnattgyysttnydtvnmtsfcdfyiiprnqeekcteyinhgl

SCOPe Domain Coordinates for d2i2sa_:

Click to download the PDB-style file with coordinates for d2i2sa_.
(The format of our PDB-style files is described here.)

Timeline for d2i2sa_: