Lineage for d2depb_ (2dep B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832343Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2832344Protein automated matches [190075] (132 species)
    not a true protein
  7. 2832539Species Clostridium stercorarium [TaxId:1510] [187615] (1 PDB entry)
  8. 2832541Domain d2depb_: 2dep B: [163618]
    automated match to d1hiza_

Details for d2depb_

PDB Entry: 2dep (more details), 1.8 Å

PDB Description: crystal structure of xylanase b from clostridium stercorarium f9
PDB Compounds: (B:) Thermostable celloxylanase

SCOPe Domain Sequences for d2depb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2depb_ c.1.8.0 (B:) automated matches {Clostridium stercorarium [TaxId: 1510]}
ipslaeafrdyfpigaaiepgyttgqiaelykkhvnmlvaenamkpaslqptegnfqwad
adrivqfakengmelrfhtlvwhnqtpdwffldkegkpmveetdpqkreenrklllqrle
nyiravvlrykddikswdvvneviepndpggmrnspwyqitgteyievafratreaggsd
iklyindyntddpvkrdilyelvknllekgvpidgvghqthidiynppveriiesikkfa
glgldniiteldmsiyswndrsdygdsipdyiltlqakryqelfdalkenkdivsavvfw
gisdkyswlngfpvkrtnapllfdrnfmpkpafwaivdp

SCOPe Domain Coordinates for d2depb_:

Click to download the PDB-style file with coordinates for d2depb_.
(The format of our PDB-style files is described here.)

Timeline for d2depb_:

View in 3D
Domains from other chains:
(mouse over for more information)
d2depa_